Lonsdalea populi: I6N93_01040
Help
Entry
I6N93_01040 CDS
T06954
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00300
Lysine biosynthesis
lpop00470
D-Amino acid metabolism
lpop01100
Metabolic pathways
lpop01110
Biosynthesis of secondary metabolites
lpop01120
Microbial metabolism in diverse environments
lpop01230
Biosynthesis of amino acids
Module
lpop_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6N93_01040 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I6N93_01040 (dapF)
Enzymes [BR:
lpop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I6N93_01040 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QPQ24433
LinkDB
All DBs
Position
226569..227393
Genome browser
AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRHINVSTHSGRMVLSVTEDERVRVNMGE
PNFEPQQIPFRAAKAEKTYIMRVAEHTVLCGAVSMGNPHCVVQVDDVDMAPVETLGPLLE
SHERFPERANIGFMQVVNRDLIRLRVFERGAGETQACGSGACGAVAVGIQLGLLSAEVKV
QLPGGELDIHWAGPGNPLFMTGPATHVYDGFIYL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtttgggcaatgactttatggttgtcgatgccgttacg
caaaatgtctatttttcgcccgagctaatccgccgcctggcggatcgccactgcggcgtg
ggcttcgaccagttgctggtcgttgagccgccatacgatcctgagctggatttccattac
cgcatttttaacgccgacggcagcgaggtggcgcaatgcggcaacggcgcccgctgcttc
gctcgtttcgtgcgtctgaaagggctgacgaataaacgtcatatcaacgtgagcacccat
agtggacgcatggtgctgtcggtcaccgaagatgaacgggtccgcgttaatatgggcgag
cccaacttcgaaccgcagcagattccgtttcgcgccgcaaaagccgagaaaacctacatc
atgcgcgtggcggaacacactgtgctgtgcggcgcggtgtcgatgggcaacccgcactgc
gtcgtgcaggtcgatgacgtcgatatggcgccggtcgaaacgctggggccgttgctcgaa
agtcatgaacgtttccccgaacgcgctaacattggttttatgcaggttgttaatcgcgat
ctcattcggctgcgggtttttgagcgcggcgcgggagaaacgcaggcctgcggcagcggc
gcttgtggggccgtcgcggttgggattcagctagggctgctgtcggcggaagtcaaagtg
caactgccgggcggcgagctggatattcattgggcggggccgggaaacccgttgttcatg
acgggtccagccacgcatgtttatgatggattcatttatttatga
DBGET
integrated database retrieval system