KEGG   Lonsdalea populi: I6N93_01040
Entry
I6N93_01040       CDS       T06954                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
lpop  Lonsdalea populi
Pathway
lpop00300  Lysine biosynthesis
lpop00470  D-Amino acid metabolism
lpop01100  Metabolic pathways
lpop01110  Biosynthesis of secondary metabolites
lpop01120  Microbial metabolism in diverse environments
lpop01230  Biosynthesis of amino acids
Module
lpop_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    I6N93_01040 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    I6N93_01040 (dapF)
Enzymes [BR:lpop01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     I6N93_01040 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QPQ24433
LinkDB
Position
226569..227393
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRHINVSTHSGRMVLSVTEDERVRVNMGE
PNFEPQQIPFRAAKAEKTYIMRVAEHTVLCGAVSMGNPHCVVQVDDVDMAPVETLGPLLE
SHERFPERANIGFMQVVNRDLIRLRVFERGAGETQACGSGACGAVAVGIQLGLLSAEVKV
QLPGGELDIHWAGPGNPLFMTGPATHVYDGFIYL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtttgggcaatgactttatggttgtcgatgccgttacg
caaaatgtctatttttcgcccgagctaatccgccgcctggcggatcgccactgcggcgtg
ggcttcgaccagttgctggtcgttgagccgccatacgatcctgagctggatttccattac
cgcatttttaacgccgacggcagcgaggtggcgcaatgcggcaacggcgcccgctgcttc
gctcgtttcgtgcgtctgaaagggctgacgaataaacgtcatatcaacgtgagcacccat
agtggacgcatggtgctgtcggtcaccgaagatgaacgggtccgcgttaatatgggcgag
cccaacttcgaaccgcagcagattccgtttcgcgccgcaaaagccgagaaaacctacatc
atgcgcgtggcggaacacactgtgctgtgcggcgcggtgtcgatgggcaacccgcactgc
gtcgtgcaggtcgatgacgtcgatatggcgccggtcgaaacgctggggccgttgctcgaa
agtcatgaacgtttccccgaacgcgctaacattggttttatgcaggttgttaatcgcgat
ctcattcggctgcgggtttttgagcgcggcgcgggagaaacgcaggcctgcggcagcggc
gcttgtggggccgtcgcggttgggattcagctagggctgctgtcggcggaagtcaaagtg
caactgccgggcggcgagctggatattcattgggcggggccgggaaacccgttgttcatg
acgggtccagccacgcatgtttatgatggattcatttatttatga

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