Lonsdalea populi: I6N93_01060
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Entry
I6N93_01060 CDS
T06954
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpop
Lonsdalea populi
Pathway
lpop03420
Nucleotide excision repair
lpop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6N93_01060 (uvrD)
03430 Mismatch repair
I6N93_01060 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpop03400
]
I6N93_01060 (uvrD)
Enzymes [BR:
lpop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6N93_01060 (uvrD)
DNA repair and recombination proteins [BR:
lpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6N93_01060 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
I6N93_01060 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
QPQ24437
LinkDB
All DBs
Position
229813..231975
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLVKALNLDDKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEQTWLRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRSRFNNILVDEFQDTNRIQYAWVRMLAGDS
ARVMIVGDDDQSIYGWRGAQVENIQHFLNDFPQASTIRLEQNYRSSANILNAANALIAHN
GDRLGKNLWTDGVEGDPISLYCAFNELDEARFVVSRIKAWQEMGGSLNECAILYRSNAQS
RVLEEALLQQSLPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRALLQEKALAGRAAGALQRFLELVDALANDTAEQPLHVQ
TDRVIKDSGLWSMYEQEKGEKGQTRIENLEELVTATRQYSYQEEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY
VGVTRAMRKLTMTYAETRRLYGKEVYHRPSRFIGELPQECVEEVRLRASVSRPVNQQRLG
TLISESDSGYKLGQRVRHAKFGEGTIVNLEGGGDHCRVQVAFPGQGIKWLVAAYAKLDIV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgatctgctcgacagcctgaacgataaacagcgcgacgccgtcgcggct
ccccgcagcaacatgctggtgctggccggggctggcagcggcaagacgcgggtgctggtg
catcgtatcgcctggctgatgtcggtggagaattgctcgccgtactccatcatggcggtg
acgttcactaataaagccgccgcagagatgcgccatcgcatcgaacagctaattggtacc
agtcagggcggcatgtggatcgggacttttcacggtctggcccatcggctgctgcgcgcg
catcatcttgatgccggactgccgcaggactttcagattttggacagcgaagaccagctg
cgtctgcttaagcgtctggtcaaagcgctcaatctggacgacaaacagtggccgccgcgg
caggcgatgtggtacatcaacggcaaaaaagacgaaggcctgcgtcctcagcatatcgaa
agctacggcaatccggtggagcagacttggctgcgcgtttatcaggcttatcaggaagcc
tgcgatcgggccgggctggtggatttcgccgaactgctgctgcgcgcccacgaactgtgg
ctgaacaagccgcacattcttcagcactaccggagtcgctttaacaacattctggtggac
gaattccaggacaccaaccgtattcagtatgcctgggtgcgtatgctggcgggcgacagc
gcccgagtcatgatcgtgggtgacgatgatcaatctatctacggctggcgcggggcgcag
gtcgaaaacattcagcatttcctgaatgatttcccacaggcttcgaccatccgcctggag
cagaactatcgctccagcgccaacatcctcaacgcggccaatgccctgatcgcccataac
ggcgatcgtctggggaaaaatttgtggaccgacggcgtcgaaggcgacccgatctccctg
tactgcgcgttcaacgaactggacgaagcgcggtttgtcgtcagccgcatcaaggcgtgg
caggaaatgggcggcagcctgaacgagtgcgccattctctaccggagcaacgcccaatct
cgtgtgctggaagaggcgctgctacagcaaagcctgccctatcgcatttatggcggaatg
cgcttcttcgaacgacaggaaatcaaagatgccctggcctacctgcggctgatcgccaac
cgtaacgacgatgcggcgtatgaacgcgtggtgaataccccgacgcgcggcatcggcgac
cggacgctggacgtggtgcgtcaggcggcgcgcgaccgtcaactgaccctgtggcaggcc
acgcgcgcgttgctacaggagaaggcgctggccggacgcgccgccggtgcgttgcagcgt
ttcctcgaactggtggacgcgctggccaacgataccgccgagcagccgctgcacgtacaa
actgaccgcgtgatcaaagattccggcctgtggagcatgtacgaacaggaaaaaggcgag
aagggccagacccgcatcgagaacctggaggaactggttaccgcgacgcgtcagtacagt
tatcaggaagaagatcaggacctgatgccgctgcaggcgtttctgtctcatgcggcgctg
gaagcgggagaagggcaggcggacgcctatcaggatgcggtccagctgatgacgctgcac
tccgccaaagggctggaatttccccaggtgttcatcgtcgggatggaagagggcatgttt
ccaagccagatgtctctcgaagagggcggacgactggaggaagagcgccgactggcgtat
gtcggggtgacccgtgcgatgcgtaaactgacgatgacctacgcggaaacccgccgtcta
tacggcaaagaggtgtatcaccgtccgtcgcgttttatcggtgaactgccgcaggagtgc
gtggaggaggttcgactgcgcgccagcgtgtcgcggcccgtcaaccagcagcggctggga
acgctcatttccgagagcgacagcggctataagctggggcagcgcgtgcgtcatgccaaa
ttcggcgaagggaccattgtgaatcttgaaggcggcggcgatcattgccgcgttcaggtc
gccttccctggtcaggggataaaatggctggtggcggcttatgcaaagctggacatcgta
taa
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