Lonsdalea populi: I6N93_01770
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Entry
I6N93_01770 CDS
T06954
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00730
Thiamine metabolism
lpop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
I6N93_01770 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpop03009
]
I6N93_01770 (rsgA)
Enzymes [BR:
lpop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
I6N93_01770 (rsgA)
Ribosome biogenesis [BR:
lpop03009
]
Prokaryotic type
GTPases
I6N93_01770 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
ABC_tran
MMR_HSR1
GTP_EFTU
AAA_29
AAA_16
nSTAND1
AAA_23
DUF7489
EzrA
Arf
SMC_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPQ24566
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All DBs
Position
complement(364506..365555)
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AA seq
349 aa
AA seq
DB search
MSKKKLSKGQQRRVSANHQRRLKHADSKIEWDDNQLGDAQEGTIISRFGMHADVEATDGT
QRRCNIRRTIKSLVTGDKVVWRPGNETLAGISGIVEAVHPRESVLTRPDFYDGVKPIAAN
INQIVIVSAILPELSINIIDRYLVACEMLEVEPLIVLNKIDLLDEASRQFVDEVMDIYRA
LHYRVLMVSSKIGDGMTELETELTNRISIFAGQSGVGKSSLLNALLYPEEGKILVNDVSD
NSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQVTQGFIEFRDYLGSCKFRD
CKHGTDPGCAIRAALERGEIAAERFENYHRILESLSQVKTRKSFSDSDN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaaagaaactgtcaaaaggtcagcaacgtcgggtcagcgcgaatcatcagcgc
cgccttaagcatgcagacagcaaaatcgagtgggatgacaaccaattgggcgacgctcag
gaaggcaccatcattagccgcttcggcatgcatgccgacgtggaggccaccgacggtacg
caacgtcgctgtaatattcgtcgtaccatcaaatcgctggtcaccggcgacaaggtagtc
tggcgacccggtaatgaaacgctggccggcatcagcggcatcgttgaagcggtacatcct
cgcgagtccgtactgacgcgtccggacttttacgacggcgtcaaacctatcgccgccaac
atcaatcagatcgtgattgtctccgccatcctccctgaactgtcgatcaatatcatcgac
cgttatttggtggcctgcgaaatgctggaagttgaaccactcatcgtcctgaacaagatc
gatctgctggatgaagcatcacgccagttcgtcgacgaagtcatggatatctaccgagca
ttgcattaccgagtactgatggtctccagcaaaatcggcgacggcatgacggagctggaa
accgaattgaccaaccgcattagcatctttgccggtcagtccggcgtcggcaaatccagc
ctgctcaacgccctgctctatcctgaagaaggcaaaatcctggtcaacgatgtgtccgat
aactccggactggggcaacacacgacgaccgcagcccgcctgtaccacttcccgcatggc
ggcgatgtgatcgactcacccggcgtgcgcgaattcgggctatggcatcttgagcccgag
caggtcacgcagggtttcatcgagttccgcgactatctgggcagctgtaaattccgcgat
tgcaaacatggcaccgacccaggctgcgccatacgggccgcgctggagcgtggagaaatc
gccgcagagcgttttgaaaactaccatcgcatcctcgaaagcctgtctcaggtaaaaacg
cgtaaatccttttccgattcggataactga
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