Lonsdalea populi: I6N93_02195
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Entry
I6N93_02195 CDS
T06954
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00220
Arginine biosynthesis
lpop00240
Pyrimidine metabolism
lpop00250
Alanine, aspartate and glutamate metabolism
lpop01100
Metabolic pathways
lpop01110
Biosynthesis of secondary metabolites
lpop01240
Biosynthesis of cofactors
Module
lpop_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
I6N93_02195 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
I6N93_02195 (carB)
00220 Arginine biosynthesis
I6N93_02195 (carB)
Enzymes [BR:
lpop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
I6N93_02195 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
QPQ24644
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Position
460390..463614
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIDKERPDAVLPTMGGQTALNCALELERRGVLKEFGVTMIGATA
DAIDKAEDRRRFDIAMKKIGLETARSGIAHSMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQNMRNASMAVLREIGVETGGSNVQFSVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVNLADPEA
LTTIRRELKDAGGDRIWYLADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAQEG
ANSLTPEFLRMLKRKGFADARLATLAGVSEGEIRKLRDKYNLHPVYKRVDTCAAEFSTDT
AYLYSTYEDECEANPNSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVP
VIGTSPDAIDRAEDRERFQQAVERLGLKQPANATVVAIEQAVEKAAGLGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDSVEVDVDAICDGQQVLIGGVME
HIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEKLAFELAVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTQEVIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSSSAMKKSGRALLSVREGDKGRVVDL
AAKLLKHGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYAYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTMNGGFATAMSLNADPTEQVISVQEMHAKISG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtaccgacataaaaagtatcctcattctgggcgccggcccgatcgtcatc
ggtcaggcgtgcgagttcgactactctggggcgcaggcatgcaaggcgctgcgcgaagag
ggttaccgcgtcattctggtgaactccaacccggcgacgatcatgaccgacccggaaatg
gccgatgccacctacattgagccgattcactgggaagtggtgcgcaaaatcatcgataaa
gagcggccggatgcggtgctgccgacgatgggcggccagacggcgttgaactgcgcgctg
gagctggagcgtcgtggcgtactgaaagagttcggcgtcacgatgatcggcgcgaccgcc
gatgccatcgacaaagcggaagaccgccgtcgtttcgatattgcgatgaagaaaattggg
ctggagaccgcccgctccggtattgcgcactcgatggaagaagcgctggccgtggcggct
gacgtgggtttcccgtgcattatccgtccgtcctttacgatgggcggcaccggcggcggc
atcgcctataaccgcgaagagttcgaagagatctgtacccgcggtctggatctttctccg
accaatgagctgctgattgatgagtcgctgattggctggaaagagtacgagatggaagtg
gtgcgggacaaaaacgataactgcatcatcgtctgctctatcgaaaacttcgacgcgatg
gggatccacaccggcgattcgatcactgtggctccggcacaaacgctgacggacaaggaa
taccagaacatgcgtaacgcctcgatggcggtactgcgtgaaatcggcgttgaaaccggc
ggctccaacgtgcagttctcggttaacccgaaaaatggccgtctcatcgtcattgagatg
aacccacgcgtctcccgttcatcggcgctggcctccaaagccaccggcttcccgattgcg
aagatcgccgcgaagctggcggtgggctacacgctggacgaactgatgaacgatatcacc
ggcggacgcacgcccgcatccttcgaaccgtctatcgattacgtcgtcaccaaaatcccg
cgcttcaacttcgaaaaattcgcaggctccaacgaccggctgacgacgcagatgaagtcg
gtgggtgaagtgatggcgatcggccgcacgcagcaggagtcgctgcagaaagcgttgcgc
ggactggaagtgggcgcgaccgggtttgatccgaaagtgaatctggccgatccggaggcg
ctgaccaccattcgccgtgagctgaaagacgcgggcggcgatcgcatctggtatctggcc
gatgcgttccgtgccggaatgtcggtagacggcgttttcaacctgaccaatatcgaccgc
tggttcctggtgcagattgaagaactggtgcgtctggaagagcaggtggcgcaagaaggg
gccaacagcctgacgccggagttcctgcggatgctgaagcgtaaagggtttgccgatgcg
cgtctggcgacgttggcgggcgtatcggaaggggaaatccgtaagctgcgcgacaagtac
aacctgcacccggtctacaaacgcgtggatacctgcgccgccgagttctcgaccgatacg
gcttacctgtactccacttatgaagacgagtgcgaagccaacccgaattccgaccgcgat
aaaatcatggtgctgggcggcgggccgaaccgtatcggtcagggtatcgagttcgactac
tgctgcgtacatgcctcgctggcgctgcgggaagacggctatgaaaccatcatggtcaac
tgcaacccggaaaccgtctctacggactacgacacctccgatcgcctctacttcgagccg
gtcacactggaagacgtactggaaatcgtccgtatcgaaaaaccgaagggcgtgatcgtc
cagtacggcggccagacgccgctgaaactggcgcgtgagctggaagcggccggcgtaccg
gtgatcggcaccagcccggacgccatcgaccgcgcggaagaccgcgaacgtttccagcag
gcggtcgaacgtctgggcttgaaacagccggcgaacgccacggtcgtcgccatcgaacag
gcggtggaaaaagccgcgggcctcggctatccgctggtggtgcgtccttcttatgttctg
ggcggtcgtgcgatggaaatcgtctacgacgaaacggacctgcgccgttactttcagacg
gcagtgagcgtctccaacgatgcgccggtgctgctggaccgcttcctggacgactcggtg
gaagtggacgtggacgccatctgcgacggccaacaggtgctgatcggcggcgtcatggaa
cacatcgaacaggctggggttcactcaggtgactccgcatgctcgctgccggcgtacacc
ctgagcaaagagattcaggatgtaatgcgccagcaggtggaaaaattggcgttcgaactg
gcggtgcgcgggctgatgaacgtgcagttcgcggtgaagaacaacgaagtgtatctgatt
gaggtgaacccgcgcgcggcgcgtaccgtgccgttcgtctccaaggcgaccggcgtgccg
ctggcgaaagtggcggcgcgcgtgatggcgggcaaaacgctggccgagcagggcgtcacc
caagaagtgatcccgccttattactcggtgaaagaagtggtgttgccattcaataaattc
ccgggcgtcgaccctattctggggccggaaatgcgttcgaccggtgaagtcatgggggtg
ggccgcacgtttgcagaggccttcgccaaagcgatgctgggcagcagctccgccatgaag
aaaagcggccgtgcgctgctgtcggtacgcgaaggcgacaaaggccgcgtcgtggacctg
gcggccaagctgctgaagcatggatttgaactggacgcgacgcacggcaccgcggtagtg
ctgggcgaggcgggcatcaatccgcgtctggtcaataaggtacatgaagggcgtccgcac
attcaggatcgcatcaagaacggcgagtacgcttacatcgtgaataccacggccggtcgt
caggcgattgaggactccaagctgatccgccgcagcgccctgcaatacaaggtgcactac
gacaccaccatgaacggcggattcgccacggcgatgtcgctgaacgccgatccgaccgag
caggtgatctccgtacaggaaatgcacgctaaaatcagcggataa
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