Lonsdalea populi: I6N93_02705
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Entry
I6N93_02705 CDS
T06954
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpop03000
]
I6N93_02705
Transcription factors [BR:
lpop03000
]
Prokaryotic type
Helix-turn-helix
Other families
I6N93_02705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
QPQ24741
LinkDB
All DBs
Position
583034..584200
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AA seq
388 aa
AA seq
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MSDYHFDATLAGAIVARTMQIIECNVNVMDATGRIIGSGDKERIGEIHEGALLALTQERI
VTIDDASMHILQGVKPGINLPLRQDGVIVGVVGLTGQPDGLRQYGELVCMTAEMMLEQAR
LMQLLARNSRQCEELVLNLIRCDTYSETVSEWARRLGIDLQKPRVALVVELDSGQLGVST
AMTELQQFQNLLTEPGMAPEREEGLMAIVSLTEMVVLQPLSEHGRWDPEAHLRRIQLLYQ
RLHDESPLRVRLALGNFFPGEGGLQRSYQTAKTTMKVGKQRQPDAHCYSYQDMALPVLLD
SLRGGWQANELMLPLRRLRAMDGNGIFRKTLSSWFCYNLQNTVTANALYIHKNTLEYRLH
RISDITGLNLSRVDDRLLLYIALQLEDG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattaccattttgacgccacgctggccggtgccattgtcgcgcgcacgatgcag
atcatcgaatgcaacgtgaacgtgatggatgcgacggggagaatcatcggcagcggcgac
aaggagcgtatcggcgaaattcatgagggcgcgctgctggcgctcacgcaggaacgtatc
gtcacgatcgacgacgcgtccatgcacatcctgcagggcgttaagcccggcatcaatctc
cccctgcggcaggacggcgtgatcgtcggggtggtgggcctgaccggccagccggacggg
ctgcgccagtatggcgaactggtctgcatgacggcggaaatgatgctggagcaggcgcgg
cttatgcagttgctggcgcgtaacagccgtcagtgcgaagagctggtgctgaacctgatc
cgctgcgatacctattccgagacggtcagcgaatgggcgagacggctggggatagaccta
cagaaaccacgcgttgcgctggtggtcgagttggacagcggccagctcggcgtcagtacg
gccatgaccgagctgcagcagtttcagaacctgctgacggagccgggcatggcgccggag
cgggaagagggactgatggcgattgtctctttgaccgagatggtggtgctgcaaccgctg
tccgaacacggtcgctgggacccggaagcccatctgcggcggatccaactgctgtatcag
cgcctgcatgacgaaagcccgctgcgggtgcggctggctctgggcaactttttccccggc
gaaggcggtctgcaacgttcttatcagacggcgaaaaccaccatgaaggtgggcaaacag
cgtcagcccgacgcgcattgctacagctatcaggacatggcgctgccggtgttgctggac
agcctgcgcggcggctggcaggccaacgagctgatgctgccgctaagacggctgcgggcg
atggacggcaacgggatctttcgcaaaacgctctccagctggttctgctacaacctgcaa
aacacggtcacggccaacgcgttgtacatccataaaaatacgctggaataccgtttgcat
cgtatctcggacatcaccggactgaatctctcccgcgtcgacgaccgtctgctgctgtat
atcgcgctccagctggaagacggttaa
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