Lonsdalea populi: I6N93_03100
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Entry
I6N93_03100 CDS
T06954
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpop03016
]
I6N93_03100 (truD)
Enzymes [BR:
lpop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
I6N93_03100 (truD)
Transfer RNA biogenesis [BR:
lpop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I6N93_03100 (truD)
Prokaryotic type
I6N93_03100 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QPQ25784
LinkDB
All DBs
Position
670641..671690
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AA seq
349 aa
AA seq
DB search
METSHELYWMHGKPAASGVLKASAEDFEVIEDLGFQPDGDGEHVLVRVRKRGCNTSFVAE
ALAKFARLPARAVSYAGMKDRHAVTEQWFGLHMPGKADPDWRTFELEGCEILETARHRRK
LRIGALQGNAFTLVLRQISDRAEIETRLQRISELGVPNYFGSQRFGRNGNNLEQARRWAN
NEIRVKERGKRSFYLSASRSELFNRVASARLTQKLEKTVLNGDALQLTGRGSWFVAHTDE
LETLQRRVDEHELQVTAPLPGDGEPGTQAEALAFELSCLEENDLLLSLLRRERLEPARRA
ILLYPQRMAWSWQNDDVVSVRFWLPSGCYATSVVRELMQVEEQEFDSGM
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctctcatgagctttactggatgcacggtaagcctgccgcaagcggcgtactg
aaagcgtcggcagaagactttgaggtgattgaagatctcggattccagcctgatggcgac
ggcgagcatgtgctggtccgggtgcgtaaacggggctgcaatacgtcttttgtcgccgaa
gcgctggcaaagttcgcccgtctaccggcccgcgcggtcagctatgcaggtatgaaagac
cgccatgccgtgaccgaacaatggttcggcctgcatatgcccggcaaagccgacccggac
tggcggactttcgagctggaaggatgtgaaattctggaaacggctcgtcaccgccgtaag
ctgcgcatcggtgccttacaggggaacgctttcacgctggtgctccgtcaaatcagcgac
agggcggaaatcgagacgcgcttacaacgcatatccgaactgggcgtgcctaattatttc
ggcagccagcgtttcggccgtaacggcaataaccttgagcaggctcggcgctgggcgaac
aatgagattcgcgtgaaagaacgtggtaaacgtagtttttatctttcggccagtcgtagt
gagctgtttaaccgtgtcgccagcgctcgcctgacgcaaaagctggaaaaaaccgtattg
aacggcgatgcgctgcagttgaccggtcgcggtagctggtttgttgcacatactgacgag
ctggagacattgcaacggcgtgtcgatgaacacgagctgcaggtgacggcgccgttgcca
ggcgacggcgaaccaggtacgcaggctgaagcgctggcatttgaattgtcctgtctggag
gagaacgatctgttattgtcgctgctgcgccgggagcggctggagccggcgcgtagagcc
atactattgtatccacagcgcatggcatggtcatggcagaatgatgacgttgtcagcgta
cgtttctggttgccatcaggctgttacgctaccagcgtggtgcgagagctgatgcaggtt
gaagagcaggagtttgatagcggtatgtag
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