Lonsdalea populi: I6N93_03115
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Entry
I6N93_03115 CDS
T06954
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpop03021
]
I6N93_03115 (rpoS)
Transcription machinery [BR:
lpop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6N93_03115 (rpoS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QPQ24816
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All DBs
Position
673849..674841
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AA seq
330 aa
AA seq
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MSQSTLKVNELHEDTDFDENRLDVFDDKALAEEETSDNDSLDDELLSPVSTQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVSSRKRMIESNLRLVVKIARRYNNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQMQGLDIEELFRA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtacgctgaaagttaacgagttacatgaagatactgatttcgacgagaat
aggcttgacgtatttgacgataaagcgctggcagaggaagaaaccagtgacaatgactct
ttagatgatgagttattgtcaccagttagcacccagcgcgtcttagatgctactcaactc
tatctgggagaaattggttattcgcctcttttaaccgccgaagaagaggtttattttgcc
cggcgagcgctgcgtggtgacgtatcatcacgtaaacgtatgatcgagagtaacctgcgg
ttggtggtgaaaatcgcccgtcgctataacaatcggggactagctttgttggacctgatt
gaagaagggaaccttggtctgatccgagccgttgagaagtttgacccggaaagagggttt
cgtttttcaacgtatgcaacctggtggatcaggcaaactatagagcgggcaataatgaat
caaacccgcaccatccgtttaccgattcacattgtcaaagaacttaacgtttacctgcgc
acagcacgcgagttatcccataagctagatcatgagcctagtgcggaagagattgccgaa
cagctcgataaaccagttgatgacgtgaaccgtatgttgcgtctgaacgaacgtattact
tccgttgacacgccgctgggcggagattctgaaaaggcgttgctggatattctggccgat
gagaaagacaacggtcctgaggacactacgcaggataacgatatgaagcaaaatatcgtt
aaatggttgtttgaactcaatgccaaacagcgagaagttctggctcgtcgcttcggcctt
ctgggctatgaagcagctacgttggaagatgttggtcgtgaaattggtctgactcgtgaa
cgcgtgcgtcagattcaggttgaagggctgcgtcgtctgcgtgaaatcctgcaaatgcag
gggctcgatattgaagagctgttccgtgcataa
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