Lonsdalea populi: I6N93_03530
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Entry
I6N93_03530 CDS
T06954
Name
(GenBank) class I tRNA ligase family protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00450
Selenocompound metabolism
lpop00970
Aminoacyl-tRNA biosynthesis
lpop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
I6N93_03530
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I6N93_03530
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpop01007
]
I6N93_03530
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpop03016
]
I6N93_03530
Enzymes [BR:
lpop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
I6N93_03530
Amino acid related enzymes [BR:
lpop01007
]
Aminoacyl-tRNA synthetase
Class I (U)
I6N93_03530
Transfer RNA biogenesis [BR:
lpop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
I6N93_03530
Prokaryotic type
Other AARSs
I6N93_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Cupin_2
Anticodon_3
tRNA-synt_1
AraC_binding
Cupin_3
Auxin_BP
MPI_cupin_dom
MannoseP_isomer
Cupin_7
PP-binding
PolC_DP2_central
EGF_laminin
DZR
EGF_LMN_ATRN
Motif
Other DBs
NCBI-ProteinID:
QPQ24886
LinkDB
All DBs
Position
760871..763102
Genome browser
AA seq
743 aa
AA seq
DB search
MVIHHLENAEMARMFDIDISHLDGLDFPAGWGRVAPGERSASHQHDETEMFVIVSGEGTL
LVDGHTYAVKAGSVAQFMPFESHVLENNGETELIFFLQYRRDAASAAHSAASHDRQNPAR
PQFVFSTPPTPNGDLHLGHLSGPYLGADAYVRYQRLLGNPAWHMTGSDDFQSYVMALAGR
EGSTPAEVARYYSQEIRQTLSMMDIELDHYTVTNNAEGYAEGAQRFFTRLVESGQVQMRE
AHALCDRDSGHYLYEVDVAGACPGCGNATNGNICEECGEPNVVTDLGAPITKASQLAPQK
TNVKRYMLPLHQFAHTVREHHKVGRVPARMRELAQRVFSRASLDVPVSHPSDWGIAPAEA
EGEGQVIWVWPEMSYGFLWNIEQLGKKVNQPWKADQPDASWKIVHFFGYDNSFYHSILYP
VLYRLAYPDWQPDIDYHHNEFYLLDGKKFSTSRRHAVWGKEILTPESVDAVRFYLSLTRP
EQERTNFQLSAYQAELRQTLIGEWQGWLHDLGQRTARLFAGQAPDAGIWTKEQVAFWAQL
NGHLQRMNDALNSDGFSLRRAAQQLKTLVQETLIFSQSQQRLAAVPDWKDEYRTSLALEL
AAAQLLSRIARPLMPRFADRLAAALGNTAADTWPQQAEIVTPGNAITLHQVSFFSDAKAQ
QKTPHWDWLNEKLATLLPDVTAQPAQRLSELGATSLMAVTLQYYLLNEMQADIPLEFVLN
QPLGKVADEAVRQQSSAAKGATV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggtgattcatcatttagaaaacgcagagatggcccgcatgtttgatattgatatcagt
catctggacggactggatttccctgctggctggggcagggttgcgcccggcgagcgctct
gccagccatcagcacgacgagaccgagatgttcgttatcgtcagcggcgaaggcactctg
ctggttgacggccatacttacgcagtaaaagccggaagcgtggcacagtttatgccgttt
gaatcccatgttttggaaaacaacggcgagacagagctgattttctttttgcaatatcgc
cgtgatgccgccagcgcggcacattccgccgcttcacacgatcgccagaaccctgcgcgc
ccgcagtttgttttctcgacgccgccgacgccgaacggcgatttgcatctggggcatctc
tccggcccttatctgggcgcggacgcctatgtgcgctaccagcggctgctgggcaatccg
gcctggcacatgaccggttccgatgattttcagagctacgtgatggcgctggccggccgc
gaaggctcaaccccggcggaggtggcgcgttattactcccaggagatccgccagaccctg
agcatgatggatattgaactggatcactatacggtgaccaacaatgcagaaggctatgcc
gaaggcgcgcagcgtttcttcactcggctggtggaaagtggtcaggtgcagatgcgcgag
gcgcatgcgctgtgcgacagggacagcggccactatctgtatgaagtggatgttgccgga
gcctgtccgggttgtggcaacgccaccaacggcaatatctgcgaggagtgcggcgagcct
aacgtggtaaccgatcttggtgcgccaatcactaaggccagtcagcttgcgccgcaaaag
actaatgttaagcgctatatgctgccgctgcatcagtttgcccacacggtcagagaacac
cacaaagttggccgcgtaccggccagaatgcgcgagctggctcagcgagtgttcagtcgg
gcatcgctggacgtgccggtttcccatccgtcggactgggggattgcccctgccgaagcc
gaaggtgaaggccaggttatctgggtgtggccggaaatgagctacggttttctctggaac
attgaacagctggggaaaaaagttaaccagccgtggaaagcggaccagccggatgccagc
tggaaaatcgttcacttttttggctatgacaacagcttctatcacagcattctttacccg
gtgctctaccggctggcttacccggactggcagccggatattgattatcaccacaacgaa
ttttacctgcttgacggtaaaaaattctctaccagccgccgccacgcggtctggggcaaa
gagatcctcactccggaaagcgtcgatgcggtacgcttttacctgagcctgacccgcccg
gagcaggaacgcactaatttccagctgtcggcataccaggcggagctgcgccagacctta
atcggcgaatggcagggctggctgcacgatcttggtcagcgcaccgcccgcctttttgct
ggtcaggcaccggatgccgggatctggaccaaagagcaggttgccttttgggcgcagctt
aacggccatctgcaacggatgaacgacgccctgaacagcgatggcttctcattgcgccga
gcagcacagcaactgaaaacgctggtgcaggagaccctgatcttctcgcaatcccagcag
cggctggcggcggttccggactggaaggatgagtaccgcacctcgctggctctggagctg
gcggcggcgcagctgctttcacgcattgcccggccgctgatgccacgctttgccgatcgt
ctggcagcggcgctgggcaatacggcggcggatacctggccgcagcaggcggagatcgtt
acgccgggcaacgccattaccctgcatcaggtcagtttctttagcgatgctaaagcgcag
caaaaaacgccgcactgggactggctaaacgagaaattagccacgctgctgcctgacgtc
accgcgcaaccggcgcaacgactgtcggagctgggggccacctcgctgatggcggtgacg
ctgcaatattatctgctgaacgaaatgcaggcggatattccgctggaattcgtgcttaac
cagccgctgggcaaagtggctgacgaggcggtgcggcagcagagcagcgccgcgaaggga
gcgaccgtatga
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