Lonsdalea populi: I6N93_03700
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Entry
I6N93_03700 CDS
T06954
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00300
Lysine biosynthesis
lpop00470
D-Amino acid metabolism
lpop01100
Metabolic pathways
lpop01110
Biosynthesis of secondary metabolites
lpop01120
Microbial metabolism in diverse environments
lpop01230
Biosynthesis of amino acids
Module
lpop_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6N93_03700 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I6N93_03700 (lysA)
Enzymes [BR:
lpop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I6N93_03700 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
ExoU_mid_dom
Motif
Other DBs
NCBI-ProteinID:
QPQ24916
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All DBs
Position
complement(828345..829673)
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AA seq
442 aa
AA seq
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MRHCKYDSTYITKNNIEGVEYNKLADTVGTPCYIYSANQIKDDLRQLKAVLPPELHFFYS
LKANPNLSLVSLIHQQQVGCEVCSLPELETALTAGVQPDDIIFVGPAKSYAELRRSVELG
IHAVVVESRHELEMLNQIAAEQGKRQRFALRINPDFAPAKARLVMSGKPRQFGLDESQAL
SLMAQRHAYPHLRLCGIHIYLGTRILDAQAIAHNTLNILRTAEKCQQETGVELEFVDIGG
GLGIAYYEKETPLDLALLGRLLQEPISRFQQHYPRVKLVMELGRFIVARSGVFLTRVRYV
KSSRDKRFAICDGGSNCHGAAAGLGAVIRKNFPTERLGAEQPGVALQRYDLTGPLCTPTD
IIGENVLLPTLEAGDLIGLFNSGAYGPTASPVYFLSFGYPAEVLVDGDRAVMIRRPDDMA
HLLRQQQAEPVLLSPSLEKQRA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgccactgtaaatacgacagcacatacataacaaaaaataatatcgaaggggtcgag
tataataaactcgccgataccgttggtacgccctgttatatttatagcgccaatcaaatc
aaggacgatctgcgacaacttaaagccgttttgccgcccgaacttcattttttctattcg
ctcaaagcgaacccgaatctgtcattggtcagcctgatccaccaacagcaggtaggctgt
gaagtgtgttcgctgcctgaacttgaaaccgcgttgacggccggcgtccaacccgacgac
atcatcttcgtagggccggcaaaatcttatgcggaactccggagaagcgtcgaactgggg
atccacgcggtggtggtggagtcccggcatgaactggagatgcttaatcagattgccgct
gaacagggtaaacggcagcgttttgcactgcgcattaacccagactttgcgcccgctaaa
gcccgtctcgtcatgagcggcaagccgcgacagttcggcctagatgaatcacaggcgctg
agcctgatggcgcagcgacacgcctacccacacttgcggctgtgcggcattcatatctat
ctgggtacgcggattctggatgcgcaagccattgcccacaacaccctcaatatcctgcgc
accgccgaaaaatgtcagcaagaaaccggcgttgaactggagtttgtcgatatcggcggc
gggctggggatcgcctactacgagaaggagacgccgctggatcttgccttactgggccgg
ttgttgcaggagcctatcagccggtttcagcaacactatccacgcgtaaagttggtgatg
gagctggggcgattcatcgtggctcgcagcggcgtttttctgacccgtgtccgctacgtc
aaatcgtcgcgggataagcgatttgccatttgtgacggcggctccaactgtcacggcgct
gccgccggtttgggcgcggtgatccgaaaaaacttccccacggagcgacttggcgcggaa
caaccgggcgtagcgctgcagcgttacgatctgaccggcccgttgtgcacgcccaccgac
atcatcggcgaaaatgtgctgttacccacgcttgaggcgggagatctcatcggcctgttc
aactcgggcgcatacggccccaccgcctctcccgtctattttctgagttttggctacccc
gccgaagtattggtcgatggcgatcgcgccgtcatgatccgtcggcctgacgatatggcc
catctgctgcgtcagcaacaggccgaacccgtcttgctatccccgtcacttgagaaacag
cgagcgtag
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