KEGG   Lonsdalea populi: I6N93_03765
Entry
I6N93_03765       CDS       T06954                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
lpop  Lonsdalea populi
Pathway
lpop00230  Purine metabolism
lpop00240  Pyrimidine metabolism
lpop01100  Metabolic pathways
lpop01232  Nucleotide metabolism
Module
lpop_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
lpop_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    I6N93_03765 (nrdE)
   00240 Pyrimidine metabolism
    I6N93_03765 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpop03400]
    I6N93_03765 (nrdE)
Enzymes [BR:lpop01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     I6N93_03765 (nrdE)
DNA repair and recombination proteins [BR:lpop03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    I6N93_03765 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN RNR-II_ins_dom
Other DBs
NCBI-ProteinID: QPQ25792
LinkDB
Position
complement(843117..845246)
AA seq 709 aa
MTRPLDSGLDYHALNAMLNIYDADGRIQLEQDQQAISQYLAQHVAPKTQRFATLEDKLAY
LQDENYYEANVLAQYDAAFIKALFQQAYGHQFRFKTFVGAFKFYTSYALKSFDGKRYLEG
FEDRVCLVALTLARGEETLARALVDEMMTGRFQPATPTFLNCGKQQRGELVSCFLLRIED
NMESIGRAVNSALQLSKRGGGVAFSLSNIRETGAPIKRIENQSSGIIPIMKMLEDAFSYA
NQLGARQGAGAVYLSAHHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITLHLARENKD
MHLFSPYDVQRVYGQPLSEIAISEKYQEMIDNPTIRKWTISARQFFQTLAEIQFESGYPY
MMFEDTVNRANPIHGRINMSNLCSEILQVNQASEYEEDLTYRKIGKDISCNLGSLNIANV
MDGKDIGRAVEFAVRGLTAVSDMSQLNAVPSIAKGNADSHAIGLGQMNLHGYLAREGMYY
GSEEALDFTNMYFYTVAYHALRASNQLAIERGKTFKGFELSTYASGAFFDKYLQQEWQPA
TEKVRALFADNGIRLPNREDWQQLRNSVIAKGLYNQNLQAIPPTGSISYINHATASIHPI
VSRIEIRKEGKIGRVYYPAPFMTNENLALYQDAYDIGPQKIIDTYAVATQHVDQGLSLTL
FFPDTATTRDINKAQIYAWKQGIKTLYYIRVRQMALEGTEIEGCVSCAL
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgacgcggcccctcgacagcgggctcgactaccatgcgctcaacgccatgctgaacatt
tacgatgccgacggccggattcagctggagcaggatcagcaggccatcagtcagtatctc
gctcaacatgtcgcgcccaaaacgcagcgcttcgccacgctggaagacaagctggcctat
ctgcaggatgagaattactacgaagccaacgtgctggcccagtacgacgccgcgttcatc
aaagcgctgttccaacaggcttacggccaccaattccgtttcaaaaccttcgtcggcgcg
ttcaagttttacaccagctacgccctgaaaagcttcgacggtaaacgctatctggaaggg
tttgaggaccgggtctgcctggtcgcgctgacgctggcgcgcggcgaagagacgctggcg
cgagcattggtcgatgagatgatgaccgggcgttttcagcccgcgacgccgacattcctc
aactgcggcaagcagcagcgtggcgagctggtctcctgcttcctgctgcgtatcgaagac
aacatggagtccatcggccgggccgttaactccgcgttgcagctgtccaagcgtggcggc
ggcgtggcgttttcgctgagcaacatccgcgaaaccggcgcccccatcaaacgtatcgaa
aaccagtcatcgggcattatcccgatcatgaaaatgcttgaagacgcgttctcctacgcc
aaccagctgggcgcgcgtcagggcgcgggcgcggtctatctgagcgcgcaccaccccgac
ataatgcggttcctcgataccaagcgggaaaacgcggacgagaaaattaggattaaaacg
ctgtcgctcggcgtggtgatcccggatatcacgctgcatctggcgcgtgaaaacaaagac
atgcatctgttttcaccctatgacgttcagcgggtttacggtcagccgctgtcggaaatt
gccattagcgaaaaatatcaggagatgatcgataacccgacaatccgcaaatggaccatc
agcgcgcgtcagttcttccagacgctggccgagatccagttcgaatccggctatccgtac
atgatgtttgaagacaccgttaaccgggccaacccgatccacggccgcatcaacatgagc
aacctgtgttcagagattttgcaggtcaaccaggcgagcgagtatgaagaagatctcacc
taccggaagatcgggaaggacatctcctgcaacctcggctcgctcaacattgcgaatgtg
atggacggcaaagatatcggccgcgcggtggagttcgccgtgcgcggtctgaccgccgtc
tctgatatgagccagctcaacgcggtgccttccatcgcgaaaggcaacgcggattcccac
gccatcggcctcggacagatgaacctgcacggctacctggcgcgggagggcatgtattac
ggctcggaagaggcgctggacttcaccaacatgtacttctataccgtggcctaccatgcg
ctgcgcgcctctaaccaactggctatcgagcggggcaaaaccttcaagggttttgaactg
tccacttacgccagcggcgcgttctttgacaagtatctccagcaggaatggcaacccgcc
acggagaaagtccgtgcgttgttcgccgacaacggcattcgcctgcctaaccgtgaagac
tggcagcagttgcggaacagcgtgatcgcgaaaggtctgtataaccagaacctgcaggcg
atcccgccgaccggctctatttcctacatcaatcacgccacggccagcattcatcccatc
gtgtcgcgcattgagatccgcaaggaaggcaaaatcgggcgggtgtactatccggcgccg
tttatgaccaatgaaaacctggcgctgtatcaggacgcctacgacatcggcccgcaaaaa
atcatcgatacctatgcggtggcgacccaacatgtggatcaagggctatcgctgacgctg
ttctttccggataccgccacgacccgcgacatcaacaaggcgcagatttacgcctggaaa
cagggcatcaaaaccctttactacatccgggtgcgccagatggcgctggaaggcacagag
attgaaggctgcgtatcctgcgcattgtga

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