KEGG   Lonsdalea populi: I6N93_04095
Entry
I6N93_04095       CDS       T06954                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lpop  Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lpop02048]
    I6N93_04095
Enzymes [BR:lpop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     I6N93_04095
Prokaryotic defense system [BR:lpop02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   I6N93_04095
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD
Other DBs
NCBI-ProteinID: QPQ24990
LinkDB
Position
complement(909473..912568)
AA seq 1031 aa
MSTIGQRERATQQRLIQFFVQDLRYRYLSRSDGYAGDSNIDTEILSAWLKRRGVSDTLIT
RVLRQLDSAAALGEGKKLYYANKEVYRLLRYGVKEKEGAGEQNQTVWLIDWAHPEANDFA
IADEVTVKGEYRKRPDLVLYVNGIALGVIELKRSSVHVSEGIRQNLDNQKKTFIRNFFTT
IQLVMAGNVTQGLRYGTTETPEKYYLEWKEDNPGICTHKLDFHLSRLCSKSRLLDIVHNY
IAFDAGVKKLCRHNQFFGVEAAKQHITRREGGIIWHTQGSGKSLTMVWLAKWIRENVPNS
RVLIVTDRTELDEQIESVFMGVDEDIYRTSSGNDLIATLNHPNPWLICSLVHKFGRRSEA
EDNAATDAFITELQQSLTKTFHAKGDLFVFVDECHRTQSGKLHNAMTTILPEALFIGFTG
TPLMKKDKKKSVEVFGPYIHTYKFDEAVADGVVLDLRYEARDIDQYLTSEKKVDDWFEAK
TRGLSNLAKTQLKQKWGSMQKLLSSKSRLEQIVNDILLDMDTRPRLMDGRGNAMLVCSSV
YQACKVYEMFSQTDLAGKVAIVTSFRPDATSIKGEETGAGLTEKLFKFSTYRKMLADYFE
QSEEKVAGRIAEFEREVKQRFINEPGQMRLLIVVDKLLTGFDAPSATYLYIDKTMTDHTL
FQAICRVNRLDGEDKEYGYIIDYKDLFRSLDKAITDYTTGAFDDYDQEDVDGLLKNRLEQ
ARLDLNSALEVVRSLCEPVRAPRSLQDYQHYFCGESGENQTALSEKEALRLSFYQNVARL
LRAYASLANEMPEAGYTIKEAESIRAEVAEFEKLRYEIKLTSGDLLDMKRFEPAMRHLLD
MYVRADGSEVLMDFEELSLIELIVEKGASALSALPDDIRNNQDAMAETIENNVRKTIVDE
NPVNPKYYGRMSLLLDELITLRRQNALDYQQYLERIRDLCKQVIRPEQTAGASYPDSMDT
QAKRAFYDNFGHDEVLATRIDTTIRYTKKAEWIGDRFKEREIACALREETASYDVNIDAV
IELARKQKEYR
NT seq 3096 nt   +upstreamnt  +downstreamnt
ttgagcaccatcggccagcgcgaacgcgccacacagcagcgtctgattcagttttttgtt
caggatttaagataccgctatctaagccggagcgacgggtatgctggggacagcaatatc
gacacggaaatactgagcgcatggctgaaacggcgcggcgtcagcgatacccttattact
cgcgtacttcggcaactggattccgccgccgcgctgggtgaaggcaagaaactgtattac
gccaataaagaggtctaccgcctgctgcgttacggcgtgaaggaaaaggaaggcgcgggc
gagcagaatcagaccgtgtggctgattgactgggcgcatcctgaagccaatgatttcgcc
atcgccgacgaggtgacggtgaaaggcgaatatcgcaagcgcccggatctggtgctgtac
gttaacggcatcgcgctgggcgtcattgagcttaaacgttcgtcagtccacgtcagcgaa
ggcatccggcaaaatctcgataatcaaaagaaaacctttatccgcaatttcttcaccacc
atacagcttgtaatggcgggcaacgttacgcagggattgcgctacggcacgaccgaaacg
ccggaaaaatattatctggagtggaaggaagataatcccggcatctgtacgcataagctc
gattttcatttgagtcgcctttgcagcaaatcaaggctgctggatattgtccataattac
attgcctttgacgccggagtgaaaaaactgtgtcgccataatcagtttttcggcgtcgag
gcggctaaacagcatattacccgtcgtgaaggcgggattatctggcacacgcagggatcg
ggcaaaagcctgacgatggtctggctggcgaaatggatccgcgaaaacgtgccgaactcc
cgcgtgctgattgtgactgatcgcactgaactggatgagcagatcgaaagcgtgtttatg
ggggtggatgaagacatttatcgtacctccagcggtaacgatcttattgcaacgctcaat
cacccaaatccgtggctgatctgttcgctggtgcataaattcggtcgccgcagcgaagcg
gaagacaatgcggcaaccgacgcctttatcaccgaattacagcaatccctgacgaaaacg
ttccacgccaaaggcgatctgttcgtcttcgtggatgagtgtcaccgcacgcagtccggc
aagttacataacgccatgaccaccattctgccggaagccctgtttatcggttttaccggc
acaccgttgatgaagaaagataagaaaaagtcggtagaggttttcggcccttatatccat
acctataaatttgatgaggcggtagcagacggcgtggtgctggatctgcgctatgaggcc
cgcgatatcgatcagtatctgacgtcagagaaaaaggtcgatgactggtttgaggccaag
acgcgcggcctgtcgaatttagctaaaacccagcttaagcagaaatggggctcaatgcag
aagctgctttccagcaaatcacggcttgagcagatcgttaacgatattctgctggatatg
gacactcgcccgcgcctgatggacgggcgcggcaacgccatgctggtgtgcagcagcgtg
tatcaggcctgtaaggtttatgagatgttcagccagaccgatctggcggggaaagtggcg
attgtgaccagcttccgccccgatgcgaccagcatcaaaggtgaagaaaccggcgcgggt
ctgaccgagaagctgtttaaattctcaacctatcgcaaaatgctggccgactattttgag
caaagcgaagagaaggttgccggacgcatcgccgaattcgagcgggaagttaaacagcgc
tttattaatgaaccggggcaaatgcgcctgctcattgtagtggataagctgctgaccggc
tttgatgcaccctctgcgacttatctctatatcgataagaccatgactgaccatacgcta
tttcaggcgatttgccgggtaaaccggctggacggagaagataaagagtatggttacatt
atcgattataaagatctgtttcgctcactggataaagcgataaccgattacaccacaggc
gcattcgacgattacgatcaggaagatgttgatggcctgctgaagaaccgtctggagcag
gcgcgtctggatctcaacagtgcgctggaggtggttcgtagcctgtgcgagcccgtcaga
gcaccgcgtagtttgcaggactatcagcactatttctgcggcgagtcgggagaaaatcag
acggcattaagcgagaaagaagcgctacgcctgtcgttctatcagaatgtcgcccgcctg
ctgcgtgcttacgccagtctggcgaatgaaatgccagaagcgggttataccatcaaggag
gcagaaagcattcgcgccgaagtcgctgaattcgagaaactacgttacgaaattaaactg
accagcggcgatctgctggatatgaaacgctttgagcccgccatgcgtcacctgctggat
atgtacgttcgcgccgacggcagcgaagtgctgatggatttcgaagagttaagcctgatc
gaactcattgttgaaaagggcgcgtcggcactatccgccctgccggatgatattcgcaat
aatcaggatgcaatggcggaaaccatcgaaaacaatgtgcgtaaaaccatcgtagatgaa
aatccggtgaacccgaaatattacgggcgcatgtcgctgttgctggatgaactgattacc
cttcgccgccagaatgcgcttgattatcagcagtatctggagcgtatccgtgatttgtgt
aaacaagtcattcgcccggaacaaaccgccggagcatcctaccctgactcaatggacaca
caagcgaaacgcgcgttctatgataacttcggccatgatgaagtgctggcaacccgcatt
gatacgacgatccgctacaccaaaaaagcggaatggattggcgatcgttttaaggagcgg
gaaatcgcctgcgcattacgcgaagagaccgccagttatgacgtcaacattgatgcggtt
atagagcttgcccgcaagcagaaggaataccgctga

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