Lonsdalea populi: I6N93_04515
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Entry
I6N93_04515 CDS
T06954
Name
(GenBank) Tar ligand binding domain-containing protein
KO
K05876
methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
Organism
lpop
Lonsdalea populi
Pathway
lpop02020
Two-component system
lpop02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6N93_04515
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
I6N93_04515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lpop02035
]
I6N93_04515
Bacterial motility proteins [BR:
lpop02035
]
Flagellar system
Chemotaxis proteins
MCPs
I6N93_04515
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Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
TarH
HAMP
4HB_MCP_1
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
QPQ25061
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All DBs
Position
1004830..1006488
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AA seq
552 aa
AA seq
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MSIKRFSFIILGTLLLIFFASTISNVWMLIRSNDSLDSVNKEIRVVLSVIDPINHSRTMR
VRIMEYMEDMEEGGRQNSQTMREGVNAVLAKADAAFQAYLNAPKQPSEGPLADAYRTTYL
AYRQDGLQPLLDAAAKNDEPTFYAQLAVVRKLDRQYEIALDKLLEFREQYAKQLNQDAQS
NFTFSMALIVISAVVFIAIIAGMIFLLKRFVLDQLGIAKDHCSQIARGHLETSVNVHLKG
EIGDLMRSMEQMRLSLVQIIGQVRNSSYTVAHASQEIAAGNIDLSSRTEQQASALAQTAA
SMEELGATVKQNTANVYQATSLTQDAVKAAQEGEKVAKEVGETMLGITSSSKKIEDITSV
INGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIEGLISESVSG
VRMGSEQVTKTGEAMSAIITSITRINDLMGEIATASDEQSRGIGQIEQAVTEMDGVTQQN
AALVQESAAAAASLEEQVHHLTHAVSSFKLPADENTLLRPTLTKKTSSSSNAKTLPASTG
SKKTGEDNWEKF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaaacgcttctcttttattattcttggtacacttttacttatttttttcgcc
agtacgatatcgaatgtctggatgctgatacgcagcaacgattcactggatagtgtgaat
aaagaaatacgcgttgtgctgtcggtcattgaccccatcaatcacagccgcaccatgcga
gtacgtatcatggaatatatggaggatatggaagaagggggccgtcagaattcccagacg
atgcgggagggcgtaaacgccgtcctggcgaaagcggatgcggcatttcaggcttacctt
aatgctcccaagcaaccgtcggaaggtccgctggccgacgcgtatcgcaccacttatctc
gcctatcgtcaggatggattgcagcctctgctggatgcggctgccaaaaacgacgaaccc
acattttatgcgcagctggcggttgtccgaaagctggaccgtcagtacgaaatcgcactg
gataaactcctggaattccgtgagcaatatgccaaacagctgaatcaggatgcgcagagt
aacttcaccttctcaatggccctgattgttatctccgctgtggtgtttatcgctatcatc
gccgggatgattttcctgctgaaacgctttgttctggatcaactgggtattgccaaagat
cactgcagtcagattgcccgcggtcatctggaaacctcggtgaatgtgcatctgaaaggc
gagattggcgatctgatgcgctccatggagcagatgcgtctctcactggtgcagattatc
gggcaggtgcgcaactcgagctataccgtcgctcacgcgtcccaggaaattgcggcgggc
aacatcgacctgtcttcccgcacagaacagcaggcgtccgcgctggcgcaaacggcggcg
agcatggaagagctgggcgcgaccgtcaaacagaatacggcgaacgtgtatcaggcgact
agcctgactcaggacgcggtgaaagcggcgcaggagggggaaaaggtggccaaagaagtg
ggtgagaccatgctgggcatcacctctagttcgaagaaaatcgaagatattactagcgtc
atcaacggtattgcattccagaccaatatactggcattgaacgcggcggtagaagcggcc
agagccggagagcaagggcgggggttcgctgttgtggccggtgaggtccgcaatctggcg
cagcgcagcgctcaggcggcaaaagagattgaagggctgattagcgaatcggtgagcggc
gtgcgtatgggatcggagcaggtcacgaagaccggagaggcgatgtccgccattatcacc
tccatcacgcgcattaacgatttgatgggagaaatcgccacggcgtccgacgagcagagc
cgcggtatcggtcagatagaacaagcggtgacggaaatggatggcgtgacgcagcaaaat
gcggcgttggttcaggaatccgcggcagcagccgcgtcgctggaagagcaggtgcatcat
ctgactcacgccgtctcctctttcaaactccccgcagatgaaaacacgctgttacggcct
acgctaacgaagaaaacgtcatcttcctccaacgccaaaacgctgcctgcgagcaccggc
agtaagaaaacgggcgaggataactgggaaaaattctaa
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