Lonsdalea populi: I6N93_04575
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Entry
I6N93_04575 CDS
T06954
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpop03400
]
I6N93_04575 (sbcD)
DNA repair and recombination proteins [BR:
lpop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6N93_04575 (sbcD)
Archaeal homologous recombinant proteins
I6N93_04575 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
UBL_AVO1
Motif
Other DBs
NCBI-ProteinID:
QPQ25071
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All DBs
Position
complement(1024198..1025430)
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AA seq
410 aa
AA seq
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MQIIHTSDWHLGQYFYTKSRAAEHQAFLRWLIEQVEQHHVDAVVVAGDIFDNGTPPSYAR
EMYNRFVVELHQTGCQLVILGGNHDSVATLNESRLLLSCLNTQVIASCEGDIEQQVIVLN
NRQGEPGALLCAIPFLRPRDVLTSQAGQSGADKQRALQEAIADHYQRSYQLAVRRRDEMG
LALPVIATGHLTTVGVTATDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRIAQTEH
IRYSGSPIPLSFDELNHEKSVYLVRFEQDKLEDVAPLTIPAFQPMQLVKGSLPEIERRLA
GFREYDGEKPVWLDIEIATQDYLSDIQQHIQNLTDDLNVEVVLLRRAREQHLQMLVQQEK
ETLDELLPEEVFERRLALESDLEERQQQHLRTLFTQVLQEVVDDSQEAKA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattatccatacctccgactggcatcttggacagtacttctataccaagagccgg
gccgcagaacatcaggcgtttctgcgctggctgattgagcaggtggagcagcatcacgtc
gatgccgtcgttgtggccggcgacattttcgataacggcacgccgccgagctacgcccgg
gaaatgtacaaccgctttgtggtcgagctccatcagaccggctgtcaattggtcatttta
ggcggtaaccatgattccgtcgccacgcttaacgagtcgcgactgctgctctcctgcctg
aacacgcaggtcattgcgagctgcgaaggtgatatcgaacagcaggtcatcgtactgaac
aaccgacagggcgaacctggcgcactgctgtgcgctattccgttcctgcggccgcgcgac
gtgctcaccagccaggccggacagtcgggcgccgacaaacagcgggcgttgcaggaagcg
attgccgaccactatcagcgcagctatcagcttgccgtgcgccgccgcgatgaaatgggc
ctcgcgctgccggttatcgccaccgggcacctaacgaccgtgggcgtcaccgccacggac
tcagttcgggatatctacatcggtacgttggatgcttttcccgctcaggcgtttccgccg
gcggattacatcgctctcggtcatatccaccgtcctcagcgcatcgctcagacggaacac
atccgctacagcggctcgccgatccccctcagtttcgacgagttgaatcacgagaaatcg
gtgtatctggtgcgtttcgagcaggacaaactcgaagacgtcgcgcccctgacgatccct
gcatttcaaccgatgcaactggtcaaaggcagtctgcccgagatcgaacgccgacttgcc
ggttttcgcgaatacgacggcgaaaaaccggtttggctggatattgaaatcgccacgcag
gactacctgagcgacatccagcaacatattcagaacctgacggacgacttgaacgtggaa
gtggtgctgttacgccgcgcacgcgaacaacatctgcaaatgctggttcagcaggagaaa
gagacgctggacgaactcctccccgaagaagtcttcgagagacggctggcgctggaatcg
gatctggaggagcgacaacagcaacatttgcgcacgctgttcactcaggtgttgcaggaa
gtggtggacgatagccaggaggcaaaagcatga
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