Lonsdalea populi: I6N93_04825
Help
Entry
I6N93_04825 CDS
T06954
Name
(GenBank) SmdA family multidrug ABC transporter permease/ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lpop
Lonsdalea populi
Pathway
lpop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I6N93_04825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_04825
Transporters [BR:
lpop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
I6N93_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
RsgA_GTPase
AAA_29
AAA_16
AAA_33
AFG1_ATPase
AAA_23
Rad17
T2SSE
DUF87
nSTAND3
TsaE
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QPQ25120
LinkDB
All DBs
Position
1083624..1085393
Genome browser
AA seq
589 aa
AA seq
DB search
MRLFAQLGWYFRREWKRYLGAVILLIVIAILQLLPPALVGIVVDGVTQHDMPAATAMGWI
GLMALSAVLTYVLRYFWRVLLFGASYQLAVELRGDFYRQLSRQHPAFYLRHRTGDLIARA
TNDVDRVVFAAGEGVLTFVDSLMMGCAVLVVMCTQLSWQLTLLSLAPMPIMSIIIKHYGT
QLHHRFKAAQAAFSMLNNQTQESLTSIRMIKSFGLEDYQSQRFAEVAADTGAKNMRVARV
DARFDPTIYIAVALSNLLAIGGGSWMVIHGTMTLGELTSFVMYLGLMIWPMLALAWMLNI
VERGSAGYSRIRQLLSEKPVVVDGVQPLPDEPGTLAANIQAFHYPQHGQTVLHNVSFTLQ
PGRMLGLCGPTGSGKSTLIALLLRSFDVEEGRISYHGLPLDSIRLDDLRSRFAVVGQTPF
LFADTVAGNIALGRPDATKAQIEEAARLANVHDDILRLPQGYETEVGERGVMLSGGQKQR
IAIARALLLEAEVLVLDDALSAVDGRTEHEILNNLREWGERRTLIISAHRLSALVNADEI
LVLQQGQVAQRGNHQALSLESGWYQDMYRYQQLEAALDEPTSLEEVKGE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgagactttttgctcaactaggatggtatttccgccgtgaatggaagcgttatctgggg
gcggtaatcctcttaatcgtcatcgccatactgcaattactgcctccggcgcttgtcgga
attgtcgtcgatggcgtaacgcaacacgatatgccggccgctaccgcgatggggtggatc
gggctcatggcgctgtccgccgtattaacttacgtgctgagatatttctggcgcgttctg
ctgtttggcgcgtcctatcaactggcggtggagctgcgtggtgatttttatcgtcaactc
agccgtcagcatcctgccttttatctgcgtcatcgcaccggagatttgatcgcgagagcc
accaatgacgtcgaccgagtagtctttgccgccggtgaaggcgtgctgacgtttgtcgat
tctctgatgatggggtgcgccgtgctggtggtgatgtgcacacagctcagctggcaattg
acgctgctgtctttggcgccaatgccgatcatgtccatcattatcaagcactacggtacg
cagctgcaccaccgtttcaaagccgctcaagcggcgttttcaatgctgaataatcagacg
caggaaagcctgaccagtatccggatgatcaaatcgtttgggctggaggattatcagtct
cagcgtttcgccgaagtcgccgccgacacgggtgccaaaaatatgcgagtggcacgcgtg
gatgcgcggttcgacccaacaatttatattgctgttgcattgtccaaccttctggcaatt
ggtggcggcagttggatggtgatccatgggacgatgacgctgggcgaattgaccagcttc
gtcatgtatttgggactgatgatttggccgatgttggcgctagcctggatgttaaacatc
gttgaacgtggcagtgccggctatagccgtatccgtcagctcctgtccgagaaaccggtg
gtggttgatggtgttcagcctctgccggacgagcccggaacgctggcggcaaatattcag
gcatttcattatccgcagcacggtcagaccgtattacataacgtcagtttcacgctgcaa
ccgggaagaatgctggggctctgcggccccacgggttccggaaaaagtacgttgatcgct
ttgttgctgcgttcattcgatgtggaggagggaagaatctcttaccacgggcttcccctc
gacagtattcgtctggatgacctgaggagccggttcgccgtcgtgggacaaacgccgttc
ctgtttgcggatacggtagcaggcaatattgccttgggacgaccggatgcgaccaaagcg
caaattgaggaagcggcgcgtctggcgaatgttcacgacgatattctgcgtttgccgcag
gggtatgagaccgaagtgggcgagcgcggcgtcatgctctccggcggtcagaagcagcgg
attgctattgcccgcgcgctcctgctggaagccgaggtgctggtgctggatgatgccttg
tctgccgtggacggacgcaccgaacacgaaatattgaacaacctgcgtgagtggggtgaa
aggcgcacgctgatcatcagcgcacaccggctttccgccttggtcaacgcggatgaaatc
ctcgtgctgcaacagggccaggtggcgcagcgcggcaatcatcaggcgttgtcactcgaa
tcaggttggtatcaggacatgtatcgttaccagcaactggaagccgcattggacgagccg
acgtcgcttgaggaggtcaaaggtgaataa
DBGET
integrated database retrieval system
