Lonsdalea populi: I6N93_04830
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Entry
I6N93_04830 CDS
T06954
Name
(GenBank) SmdB family multidrug efflux ABC transporter permease/ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lpop
Lonsdalea populi
Pathway
lpop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I6N93_04830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_04830
Transporters [BR:
lpop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
I6N93_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
nSTAND3
AAA_25
RsgA_GTPase
AAA_29
MMR_HSR1
AAA_23
DEAD
Zeta_toxin
Dynamin_N
DUF87
AAA_33
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QPQ25121
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Position
1085386..1087176
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AA seq
596 aa
AA seq
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MNNSHPLWPTLKRLLAYGSPWRKPLAVGVVMLWVAAAAEVAGPILISYFIDHLVSKGQFP
LMLASGLAAVYVLLQLLAASLHYLQSLTFNRVAVGVVQQLRIDVMDAALRQPLSTFDTQP
VGQLISRVTNDTEVVRDLYVMVVATVLRSAALISAMMVAMFSLDWRMALVALTIFPAVMV
VMVIYQRYSTPIVRRVRSYLADINDGFNEVISGMSVIQQFRQQARFGKRLSEVSQKHYLA
RMQTLRLEGFLLRPLLSLFSALVMCGLLLQFGFSSVGSVGVGVLYAFINYLGRLNEPLIE
LTTQQSMLQQAVVAGERIFALMDGTRQDYGDDLRPLASGRIDIGDVTFSYRSGKPVLRNI
NLHIPDKGFVALVGHTGSGKSTLANLLMGYYTPDIGVIRLDQRPLPTLSHTVLRSNVAMV
QQDPVVLADSVYANVTLGRDIDEENVWHVLKMVQLAELVRDMPEGIHSRIGEQGNNLSVG
QKQLLALARVLVNSPKVLILDEATANIDSGTEQAIQKALRLIRVQTTLVVIAHRLSTIVE
ADNILVLNHGEIAEQGTHMQLLAQQGRYYQMYQLQLAGQALAEAKRYDTDTAEMSF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgaataattcacatccgctctggccgacgctgaaacgtctactggcctacggctcaccc
tggcgtaagccgctggcggtaggcgtggtgatgctctgggttgcggcggcggctgaagtc
gcaggacccatactcatcagttattttatcgaccatctcgtctcaaaagggcagttcccg
ctgatgttggccagcggtttggcggcagtttacgtgttgctgcaactcctcgccgcatca
ctgcactacctgcaatcgttgacctttaatcgggttgcggtgggcgtcgtacagcaatta
cgcatcgatgtgatggacgccgcgttacgtcaaccgctgtcgacgttcgatactcagcct
gtcgggcaactgatttcccgggtgacgaacgatacggaagtggtccgggatctctacgtg
atggtggtggcgacggtgctgcgcagcgcggcgctcatcagcgccatgatggtggcgatg
ttcagccttgattggcgtatggcgctcgttgcgctgaccatttttccggctgtgatggtg
gtgatggttatttaccagcgctatagtacgcccatcgtgcgccgtgtgcgtagttatctg
gcggatatcaacgatggctttaacgaagtcatcagtggtatgagcgtcattcagcaattt
cgtcagcaggctcggttcggcaaacgcctgagtgaagtcagtcaaaagcactatttagcg
cgtatgcaaacgctgcgtctggaaggctttctgttacgtccgctgctgagcctgttttcc
gcgttggtgatgtgcgggcttctgttgcagttcggctttagctcggtcggctcggtaggt
gttggcgtgttatatgccttcattaactatcttggacggctcaacgaacccttgattgag
ctgacgactcagcagtcgatgctgcagcaagccgtcgtggccggagagcgtattttcgcg
ctgatggatggcacgcgtcaggattatggcgacgatttacgtcccctagccagcgggcgc
attgatatcggcgatgtaactttctcttaccgcagcggcaagccggtattacgtaacatc
aatctgcacatccctgataagggatttgtcgcgctggtggggcataccggcagcggcaag
agcacgctggcgaatctgcttatggggtattacacccccgatattggcgtcattcggctg
gatcagcgtccgctgccgacgttgtctcacaccgtgctgcgcagcaatgtggcaatggtt
cagcaggatccggtggtcctcgcggactcggtctatgcaaacgtcacgttgggtcgagat
atcgatgaagagaacgtgtggcacgtgctgaaaatggtgcaactggctgagctggtcagg
gatatgcctgaggggattcatagccgaatcggcgagcagggtaataacctttccgtgggg
caaaaacagctgcttgcgctggcccgcgtactggtgaattcgcctaaagtgctcattctt
gatgaggcgaccgctaatatcgattctggaaccgaacaagctatccagaaggcgctacgg
ttgattagagttcaaaccacgctggtggtcatcgcccaccgcttatccaccatcgtcgag
gcggacaatattctggtgcttaaccacggagaaattgctgagcagggaacacatatgcaa
ttgctggctcagcaaggacgttattatcagatgtatcagctacagctggcaggacaagcc
cttgcagaggctaaacgctacgacactgacactgcggagatgtctttctag
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