Lonsdalea populi: I6N93_05005
Help
Entry
I6N93_05005 CDS
T06954
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpop03032
]
I6N93_05005 (gyrA)
03400 DNA repair and recombination proteins [BR:
lpop03400
]
I6N93_05005 (gyrA)
Enzymes [BR:
lpop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I6N93_05005 (gyrA)
DNA replication proteins [BR:
lpop03032
]
Prokaryotic type
DNA Topoisomerases
I6N93_05005 (gyrA)
DNA repair and recombination proteins [BR:
lpop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6N93_05005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QPQ25152
LinkDB
All DBs
Position
1128307..1130940
Genome browser
AA seq
877 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYINDENISLEGLMEHIKGPDFPTAAIINGKRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKMAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPRLMTLKEILSAFVRHRRE
VVTRRTIYELRKARDRAHILEGLAIALANIDPIIEMIRQAPAPAEAKAALVSHAWELGSV
AAMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKA
LLEQIAELLFILNSPDRLMEVIREELEAIKEQYNDPRRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGLNIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSASGKVVRFSEQAVRTMGRTATG
VRGINLQDDDRVVSLIVPRGDGDILTVTQNGFGKRTAVGEYPVKSRATKGVISIKVSERN
GQVIGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDGIVDGEILEEEGDEHESDNDDDEAVDDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacaccggttaacatcgaagaggagctgaaaagctcg
tatctggactatgccatgtctgtgatcgtcggacgtgcgttgccggatgttcgcgatggc
ctgaagccggtacaccgtcgcgtactgttcgcgatgaacgtactcgggaatgactggaac
aaaccttataaaaaatcggcccgtgtggtcggggacgtcatcggtaaataccacccccac
ggtgacagtgcggtttatgacaccatcgtgcgtatggcccagccattctcgctgcgttac
atgctggtggatggacagggtaactttggctcgatcgacggagattccgctgccgccatg
cgttacaccgaagttcgcatgtcgaaaatcgcccatgaattgctgtccgacctggataaa
gaaacggtcgatttcgtgccgaactacgatggcacggaacagattccagatgtcatgccg
acgcgcattcccaacctgctggtcaacggatcttccggtatcgcggtggggatggcgacc
aacattcctcctcacaacctgtctgaagtgattgacggctgtctggcctacatcaatgac
gaaaatatcagcctcgaagggctgatggagcacatcaagggacccgatttccctaccgcc
gccatcattaacggtaagcgcggcatcgaagaagcgtatcgcacaggccgcggcaaggtg
tacatccgtgctcgcgccgaagttgaagcggatgcgaaaaccggccgtgaaaccatcatc
gtgcacgaaattccttatcaggtgaacaaagcccgcctgatagaaaagatggccgagttg
gtaaaagagaagcgtatcgaaggcatcagcgcgctgcgcgatgagtccgacaaggacggg
atgcgcatcgtcatcgagatcaaacgcgatgcggtgggtgaagtggttctaaaccatctc
tactcccagacgcagatgcaggtgtctttcggcatcaacatggtggcgctgcatcagggc
cagcctcgtttgatgacgctgaaagagatcctgtccgcgtttgtacgtcaccgccgtgaa
gtggtgacgcgccgcacgatttatgagctgcgcaaagcgcgcgatcgcgcccatattctg
gaaggtctggccattgcgctggcgaatatcgacccgatcatcgagatgatccgtcaggca
ccagcgcctgccgaagcgaaagccgcgctggtttcacatgcctgggagctgggctccgtc
gccgccatgctggaacgcgccggcgacgatgccgcgcgtccggagtggctggagccggaa
ttcggtatccgcgacggtcgctattacctgaccgaacagcaggctcaggccattctggat
ctgcgtctgcagaaactgaccggtctggaacatgaaaagctgctggacgaatacaaggcg
ttgctggagcaaatcgccgaactgctgttcattctgaacagcccggatcgcctgatggaa
gtgatccgcgaagagctcgaagcgatcaaggaacaatacaacgatccgcgtcgcactgaa
atcaccgcaaacagcgccgacatcaacatcgaagatctgatcaaccaggaagatgtggtc
gtgacgctgtctcatcagggttatgtgaagtatcagccgctgaccgactacgaggcgcag
cgtcgtggcggtcgcggcaagtccgccgcccgcatcaaggaagaggacttcatcgatcgt
ctgctggtggcgaacacccacgacacgatcctgtgcttctccagccgagggcgtctgtat
tggatgaaagtctatcagctgccggaagccagccgtggagcccgtggacgtcctatcgtc
aacctgctgccgctggagccgaacgaacgtatcaccgccattctgccggtacgtgaatac
gaagaagggctaaacatctttatggcgacggccagcggtacggttaagaagaccgcgctg
accgagttcagccgtccgcgcagcgccggtatcatcgccgttaacctgaacgacggcgac
gaactgattggcgtcgacctgacggatggcagcaacgaagtcatgctgttctccgcctca
gggaaagtcgtgcgcttctccgagcaggcggtacgtactatggggcgcactgcgaccggc
gtgcgcggcatcaacctgcaggatgacgaccgtgtggtctcgctgattgttcctcgcggc
gacggcgatatcctgaccgtcacgcagaacggcttcggcaagcggactgcggtgggcgaa
tacccggtgaaatcccgcgccactaaaggggttatctccatcaaggtgagtgagcgtaac
ggacaggtcatcggcgcggtgcaggtcgatacggccgatcagattatgatgattaccgat
gcaggaacgctggtacgtacccgcgtatccgaggtcagcatcgtcggtcgtaacacccag
ggcgtcacgctgatccgtactgctgaagacgaaaacgtcgtcggcttgcagcgcgttgcc
gaaccggtggaagacgaagagctggacggtatcgtcgacggtgagatcttggaagaggaa
ggcgatgagcacgaatctgacaacgacgacgatgaagccgtggacgacgagtaa
DBGET
integrated database retrieval system
