Lonsdalea populi: I6N93_05260
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Entry
I6N93_05260 CDS
T06954
Symbol
rlpA
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpop01011
]
I6N93_05260 (rlpA)
Enzymes [BR:
lpop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
I6N93_05260 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
lpop01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
I6N93_05260 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QPQ25199
LinkDB
All DBs
Position
complement(1185138..1186166)
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AA seq
342 aa
AA seq
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MRKNWLEIVALGMVLSGCSTETEQVRPTPAPTVYNGPVKEIGGAEPRYEPFNPSTMQDYT
VNGRSYNIVKNPQNFSQTGLATWYGEELSGNRTSIGEEFDPNALAAAHPTLPIPSYVRVT
NLSNGRQLVVRVNDRGPFTPGKIIDLTRAAGERLNISNNTRVKVDFISVAPDGTLSGPGT
VGTRVAKQSFALPERPDLSVGGMSAPVMNSATDSNTPSIADTATENASSTIFPAANPTPS
GGFLGAPQPLRSGVLETSQPTVATTPAAGGNMVVQVGALKDQQRADAWLSSLKSRFNVKG
NVMQNNGLYRVQLGPFTSRQHAVELQQRLVNEAQQQSFITTL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagaattggctagagattgtagcgctcggtatggtgttgtctggctgtagcacc
gaaacggaacaggtaaggcccacgccagcgccgacggtttacaacggtccggtgaaagag
atcggcggcgcggagccgcgctacgaaccgtttaatccttccacgatgcaggattacacc
gttaacggccgaagctacaacatcgtcaaaaatccgcagaacttcagccagaccggtttg
gcgacctggtacggcgaagaactctcgggcaaccgcacatccattggcgaagagttcgat
cccaacgcgctggccgccgcgcaccctaccctgcctattcccagctatgtgcgcgtgacc
aacctcagtaatgggcgtcaactggtggtccgcgtcaacgatcgcggccctttcacgccc
ggtaaaattattgacctgacgcgcgccgcgggtgaacggctgaatatttccaacaatacc
cgcgtcaaggtcgacttcatcagcgtggcgcccgacggtacgctgtcaggtccgggcacg
gttggcacgcgggtggccaagcagagcttcgctttgcccgaacgccctgatctcagcgta
ggcggaatgagcgcgccggtcatgaattcggcaaccgacagcaatacaccgtccatcgcc
gatacggcaacggaaaacgcctcctcaaccatatttccggccgccaatccaaccccgagc
ggcggattccttggcgcgcctcagccgctgcgcagcggggttctggaaacatcacaacca
acggtggcgactacgcccgccgctggcggcaatatggtggttcaggtcggtgcgctcaag
gatcaacaacgcgccgacgcctggctgagcagtctaaaaagtcgcttcaacgtcaaaggc
aacgtgatgcagaacaatggtctgtatcgcgttcagttggggccgttcaccagccgacag
catgcggtagaactacagcagcgactggttaatgaagcacagcaacagtcttttattacg
acgctgtaa
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