Lonsdalea populi: I6N93_05530
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Entry
I6N93_05530 CDS
T06954
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00020
Citrate cycle (TCA cycle)
lpop00190
Oxidative phosphorylation
lpop00650
Butanoate metabolism
lpop00720
Other carbon fixation pathways
lpop01100
Metabolic pathways
lpop01110
Biosynthesis of secondary metabolites
lpop01120
Microbial metabolism in diverse environments
lpop01200
Carbon metabolism
Module
lpop_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lpop_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lpop_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
I6N93_05530 (sdhA)
00650 Butanoate metabolism
I6N93_05530 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
I6N93_05530 (sdhA)
00720 Other carbon fixation pathways
I6N93_05530 (sdhA)
Enzymes [BR:
lpop01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
I6N93_05530 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
FAD_oxidored
Thi4
FAD_binding_3
Lycopene_cycl
Snf7
BEX
FUSC
Motif
Other DBs
NCBI-ProteinID:
QPQ25246
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All DBs
Position
1238140..1239906
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AA seq
588 aa
AA seq
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MNLSVREFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HEDNWQWHMYDTVKGSDYIGDQNAIEYMCKTGPEAVLELEHMGLPFSRLDDGRIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC
TAICIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHVKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKITGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGMHLE
ASLSEQGASRDASESDIEASLTRLNRWNNNRDGESPVEIRRALQECMQHNFSVFREADAM
AQGLEELKAIRERLQHARLDDTSQEFNTQRIECLELDNLMDTAYATALAANYRTESRGAH
SRSDHPDRDDEHWLCHTLYLPETESMTRREVNMQPTLREAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcagtcagagagtttgatgcagtggtgattggcgcgggcggcgcgggtatg
cgcgctgcattgcaaatttcccaaatgggactgtcctgcgccctgatctccaaagtgttt
ccgacgcgttctcataccgtctccgcacagggcggtatcacggtcgcgctgggcaatact
cacgaagataactggcaatggcatatgtacgatacggtgaagggatcggactatatcggc
gatcagaatgccatcgagtacatgtgcaagaccggtccggaagctgtgctggagctggaa
catatggggctgccgttttcgcggttggatgacgggcgtatttatcagcgtcctttcggc
ggtcagtcgaaaaacttcggcggcgagcaggcggcgcgtaccgcggcggcggccgaccgc
accggacatgcgctgctgcatacgctgtatcagcaaaacctaaaaaatcacaccaccatt
ttttccgaatggtacgcgctggatctggtgaaaaatcaggacggtgcagtggtgggctgt
accgcgatttgtatcgaaaccggcgaagtcgtctacttcaaagctcgcgcaacggtgctg
gcgaccggcggcgcagggcgtatttatcagtcaacgaccaatgcgcatattaataccggc
gacggggtaggcatggcgctgcgcgccggcgtaccggtgcaggacatggaaatgtggcag
ttccacccgacggggatcgccggagcgggggtgttggttaccgaaggctgtcgcggcgag
ggcggctatttgctgaataaagacggcgaacgctttatggagcgttacgcgccgaacgcg
aaagatctggcgggccgagacgtcgtcgcgcgctccatcatgatcgaaattcgcgaaggc
cgcggctgcgacggtccgtgggggccgcacgttaagctgaagcttgaccacctcggcaaa
gaggtcctggagtcccgcctgccgggtattctggagctttctcgcaccttcgcccacgtc
gacccggtgaaagagccgatcccggtcattccgacctgccactacatgatgggcggcatt
cctaccaagatcaccggccaggcgctgaccgttaacgaacaaggcgaggatgtggtgatc
cccggcctgttcgccgtgggggagatcgcctgtgtctcagtgcacggcgccaatcgtctc
ggcggtaactcgctgctcgacctggtggtgttcggccgcgccgtggggatgcacctcgaa
gcgtcgttgtctgagcagggtgccagccgcgatgccagcgagtcggatatcgaggcctcg
ctgacacgcctcaaccgctggaacaacaatcgcgatggagaaagtccggtggagatccgc
cgggcattgcaagagtgtatgcagcataacttctccgtattccgcgaagccgatgcgatg
gcccaggggctggaggaactgaaagcgatccgcgaacggttgcagcacgcccgtctggac
gacacctcgcaagagttcaacacccagcgtatcgagtgcctggagctggataacctgatg
gatactgcatacgccaccgcgctggccgccaactatcgcacagagagccgcggcgcgcac
agccgctccgaccatcccgatcgcgacgacgaacactggctttgccacacgctgtatctg
ccggaaaccgaaagcatgacgcgccgtgaggtaaacatgcaaccgacgctgcgtgaggcg
ttcccgccaaaagcgcgcacctattaa
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