Lonsdalea populi: I6N93_06505
Help
Entry
I6N93_06505 CDS
T06954
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
lpop
Lonsdalea populi
Pathway
lpop02020
Two-component system
lpop02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6N93_06505
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6N93_06505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpop03021
]
I6N93_06505
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lpop02035
]
I6N93_06505
Transcription machinery [BR:
lpop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6N93_06505
Bacterial motility proteins [BR:
lpop02035
]
Flagellar system
Flagellar assembly proteins
Stator
I6N93_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
FtsX_ECD
GerE
Motif
Other DBs
NCBI-ProteinID:
QPQ25415
LinkDB
All DBs
Position
1499412..1500134
Genome browser
AA seq
240 aa
AA seq
DB search
MSELYTAEGTMDKNSLWKRYIPLVRHEALRLQVRLPASVELDDLLQAGGIGLLSAVERYD
SLQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVAHAMQLAEQQLGRAPTEQEV
AQILDISLEDYRQILLDTNNSQLFSYDEWREEHGDSAEALLEGNEDANPLKQLMDVNLRQ
RVMDAIDNLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRVKLMNEN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagctgtataccgctgaaggaaccatggacaaaaattccttatggaagcgctat
ataccgttagtgcgccatgaggctctccgtttgcaggttcgtttgcccgcaagcgtggaa
cttgacgaccttcttcaggccggcggtatcgggttgctcagcgcagtagagcgctacgac
tccctgcaggggacggcgttcaccacttatgccgttcagcgcatccgaggcgcaatgctg
gatgagttgcgaagccgcgactgggctccccgcagcgtgcgtcgtaacgcccgggaagtt
gctcatgccatgcaactggccgagcaacagctgggacgagctcctacggaacaagaagtc
gcgcaaattcttgatatttctctcgaggactatcgccagatcctgctcgataccaacaac
agccagctattttcttacgacgaatggcgtgaggagcatggcgacagcgccgaagcacta
ctggaaggcaatgaagatgctaacccattaaaacaacttatggacgttaacctccggcag
cgtgttatggatgctatcgataatcttccggaacgcgaaaaactcgttttgaccctctac
tatcaggaagaactcaatctaaaagagatcggtgcggttctggaggtcggggagtcacgg
gtgagtcaattacatagccaagcgattaagcgcctgcgcgttaaattaatgaacgaaaat
taa
DBGET
integrated database retrieval system
