Lonsdalea populi: I6N93_06690
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Entry
I6N93_06690 CDS
T06954
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lpop
Lonsdalea populi
Pathway
lpop03030
DNA replication
lpop03430
Mismatch repair
lpop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6N93_06690 (holB)
03430 Mismatch repair
I6N93_06690 (holB)
03440 Homologous recombination
I6N93_06690 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpop03032
]
I6N93_06690 (holB)
03400 DNA repair and recombination proteins [BR:
lpop03400
]
I6N93_06690 (holB)
Enzymes [BR:
lpop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6N93_06690 (holB)
DNA replication proteins [BR:
lpop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6N93_06690 (holB)
DNA repair and recombination proteins [BR:
lpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6N93_06690 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
DUF6587
Motif
Other DBs
NCBI-ProteinID:
QPQ25447
LinkDB
All DBs
Position
1535261..1536274
Genome browser
AA seq
337 aa
AA seq
DB search
MEWYPWLNAPYRQLLTQHQAGRGHHALLIHALAGMGESSLSYALSRWLMCRQPEGMKSCG
HCHSCRLMSADTHPDWHTLTLEKGKQSLGVDVVRTVLEKVYQRSRQGGAKVVSLPQAELL
TEAAANALLKTLEEPPQDTYFILGCRDPSRLLATLRSRCSYSYLPVPEEAHAMHWLRQRG
HTDEPALYTALRLYAGAPLAAEHLLQPGQWKPRLTLCQSLSACLAQRDMLSLVTPLNGDN
TDERIHWVASLFLDALKCHQSASSHLVNQDQLALVEQLARALTPDQLLFALQRWLQCRHQ
LRTITGANRELLLTSLLLDWEQSLSESSPRLPHPFTA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaatggtatccgtggctaaatgccccctaccgccagttgctgacgcagcatcaggcc
ggtcgaggtcaccatgcgctgcttatccatgcgctggccggaatgggcgagtcttcctta
agctatgctttgagccgctggctgatgtgccgacagccggagggaatgaaaagctgcggg
cactgtcactcatgccggttaatgagcgcggacacgcacccggactggcataccctcacc
ctagaaaaaggcaaacagagcctgggtgtggatgtcgtgcgtacagtgctcgaaaaagtg
tatcagcgttcgcgtcagggtggggcgaaagtcgttagcctgcctcaggctgagttgttg
accgaagcggcggctaacgctctactgaaaacgcttgaagagccgcctcaggacacctat
ttcattctgggttgccgggatccgtcgcggctgttggcgacgctgcgcagccggtgttcg
tactcttacttgcctgtcccagaggaggcgcacgccatgcattggctgcgtcaacgcgga
catacggacgagccggcgttgtacacggcgttgcgactttatgcgggagcgccgctggcg
gcggagcatctactgcaaccgggacagtggaaaccccgtctcacgctgtgccagtcgctt
tcggcttgtctggctcagcgggacatgttgtctctggtgacgccgctaaacggagacaat
accgatgaacgtattcattgggtggcttcgctatttttggatgcgttgaaatgccatcag
agtgcgagctcacatttagtcaatcaggatcagcttgcgctggttgaacagctggcgagg
gcattgactcctgaccaactgctgttcgcgctgcaacgttggttgcagtgtcgccaccag
ctacgcaccatcacgggagccaatcgggaactgctgctgacctctctgttgcttgactgg
gaacagagtttgtcggaatcgtctccccggttgcctcatccttttactgcctaa
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