Lonsdalea populi: I6N93_08000
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Entry
I6N93_08000 CDS
T06954
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
lpop
Lonsdalea populi
Pathway
lpop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6N93_08000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_08000
Transporters [BR:
lpop02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
I6N93_08000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
QPQ25684
LinkDB
All DBs
Position
complement(1841973..1843034)
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AA seq
353 aa
AA seq
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MKNRVATVLTTAFVLSLSPAHAAEGYVAELEQAARAEGQVNSVGMPDSWANWKDTWKDLN
SHYNLRHTDTDMSSAQEIAKFAAEKQNASADIGDVGASFGPVAMQKGVTQPYKPTTWSQI
PDWAKDKDGHWALAYTGTIAFIVNKQLVKDVPHSWADLKKGSYTVTIGDVSSAAQATNGI
LAAAYAMGGDERNLKPGLDLFADLAKAGRLGLTNPVIANIEKGEVQVGVVWDFNGLNYRD
QIDKNRFVVLIPSDGSVTSGYTTIINKYAQHPNAAKLAREYIFSDAGQINLARGYARPIR
AEHLSLPDDVKDKLLPAEQYQSARPIADPAAWEKSARLLPRQWQESVMINMQQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagggttgcaaccgtattaacgacagccttcgtgctgtcgctttctcccgct
cacgcggccgaaggctacgtcgccgagctggagcaggcggcgcgggcggaaggacaggtg
aacagcgtggggatgccggacagctgggcgaactggaaagacacctggaaagacctgaac
tcacactataacttgcgccacacggacacggacatgagctccgctcaggagatcgccaag
ttcgccgcagaaaaacagaatgccagcgcggatatcggcgatgtgggcgcttcgtttggc
cccgtcgcgatgcaaaagggcgtcacccagccctacaaacccaccacctggtcgcaaatt
cccgactgggccaaagataaagacggacactgggcgctggcgtataccggcaccatcgcc
ttcatcgtcaataagcagctggtcaaagatgtgccccacagctgggccgacctgaaaaaa
ggcagttacaccgtcactattggggacgtcagttcggcggctcaggccaccaacggcata
ctggcggctgcctatgcgatgggcggagatgagcgcaaccttaaaccggggctggatctg
ttcgccgacttagccaaggctggtcggcttggtctgaccaacccggtcatcgccaatatc
gaaaaaggcgaagtgcaggtcggggtggtatgggacttcaacggcctcaactaccgcgac
caaattgataaaaaccgctttgtcgtgctgatcccgtcagacggctcggtgacgtccggc
tataccacgattatcaacaagtatgcccagcatcctaacgccgccaaactggcgcgcgaa
tacatcttctcggatgccggtcagatcaatctggcgcgcggctatgcccgcccgattcgc
gcagagcatctgtcgctgccggatgatgtgaaagacaagctgctgccggctgaacagtat
cagtcagcccgtcccattgccgacccggctgcctgggagaaaagcgcgcgtctgctgccg
cgtcagtggcaggaatccgtcatgatcaacatgcagcagtaa
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