Lonsdalea populi: I6N93_08360
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Entry
I6N93_08360 CDS
T06954
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00061
Fatty acid biosynthesis
lpop00071
Fatty acid degradation
lpop01100
Metabolic pathways
lpop01212
Fatty acid metabolism
lpop02024
Quorum sensing
lpop04146
Peroxisome
Module
lpop_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I6N93_08360 (fadD)
00071 Fatty acid degradation
I6N93_08360 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I6N93_08360 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6N93_08360 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lpop01004
]
I6N93_08360 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpop04147
]
I6N93_08360 (fadD)
Enzymes [BR:
lpop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I6N93_08360 (fadD)
Lipid biosynthesis proteins [BR:
lpop01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I6N93_08360 (fadD)
Exosome [BR:
lpop04147
]
Exosomal proteins
Exosomal proteins of breast milk
I6N93_08360 (fadD)
Exosomal proteins of breast cancer cells
I6N93_08360 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
QPQ25751
LinkDB
All DBs
Position
complement(1920730..1922403)
Genome browser
AA seq
557 aa
AA seq
DB search
MEKIWLARYPADVPAEIDPDRYSSLMELFENSMARNAERPAFINMGETMTFRQLDERSRA
FAAYLQHQLKLQKGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYTPRELEHQLNDS
GASAMVIVSNFAHTLEKVVFNTPVKHVILTRMGDQLSAAKGTLVNFVVKYVKRLVPKYHL
PHAIAFRSVLLQGKQMPYVRPELDRGDLAFLQYTGGTSGVSKGAMLTHRNLLANLTQIRA
AYGSLLHEGHDLVVTALPLYHIFALLVNCLLFIEMGSQNLLITNPRDIPGMVKELARHPF
NVFSGVNTLFNSLLNNADFHRLDFSTLHLSVGGGAPVQQPVAKRWEALTGNHLLEGYGLT
ESSPLVTGNPYDTQQYTGSVGLPIPSTEVRIVDEHGNDVALGEAGELWIRGPQVMKGYWN
QPEETAAVLKDGWLATGDIVTSDSQGFLSIVDRKKDMILVSGFNVYPNEIEDVIVRHPDV
VEAAAVGVPSEISGEAVKVFIVLRPGSALETEALITHCRRYLTGYKVPRLFEFRDELPKS
SVGKILRRELRNETKAS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaatttggttagcgcgctatccggccgatgttcccgcagagattgatccggat
cgctattcgtcattgatggaactgttcgaaaattcgatggcgcgaaatgccgagcggcct
gcgtttatcaatatgggcgagacaatgacctttcgtcagttggatgagcgtagccgggca
tttgccgcctatttacagcatcagcttaaattgcagaagggcgaccgcgtcgcgctgatg
atgcccaacctgttgcaatatccggtggcactgttcggcgtcctccgggcggggatggtc
gtggtgaacgtcaatccgctctatacgccgcgagagctggagcaccaattgaacgacagc
ggcgccagcgcgatggtgattgtgtccaactttgcccatacgctggaaaaagtggtgttc
aataccccggtgaagcacgtgatcctgacccgaatgggggatcagctttcggccgcaaaa
ggcacgctggtgaattttgtcgtcaaatacgtcaaacgactggtgccgaaataccatctt
ccccacgccatcgccttccgcagcgtgctgctgcagggcaagcagatgccctacgtgcgc
ccagaactggatcgcggcgatttggcctttctgcaatacactggcggaaccagcggcgtg
tcgaaaggcgccatgctcacgcatcgcaatctgctggctaacctgacccaaattcgcgcc
gcctatggatcgttgctgcatgaaggccacgatttagtggtgacggcattgccgctgtac
cacatctttgcgcttctggtgaactgcttgctgttcatcgaaatgggcagtcaaaacctg
ctcattaccaacccgagagatattcccggtatggtcaaagagctggctcgtcatccattt
aacgtatttagcggcgtcaacacgctgtttaactcgcttttgaacaacgccgattttcat
cggctggatttttcaacgctgcatctgtccgtgggcggcggcgcgccggtccagcagccg
gtcgccaaacgttgggaggcgctgaccggcaaccatttgctggaaggatacggactgacc
gaaagttcgcccctggtaaccggcaacccctacgacacgcagcaatatacgggcagcgtc
ggtttacccataccctcgacggaagtccgcatcgtggatgagcatgggaacgatgtggcg
ttgggagaggcgggagaattgtggattcgagggcctcaggtcatgaaaggctactggaat
cagcctgaagagacggcggcggtgctgaaagacggatggttggctacaggtgacattgtc
acgtccgactcgcagggcttcttaagtatcgtcgaccgcaaaaaagacatgatcctggtt
tcgggattcaacgtctatccaaacgaaattgaagatgtcatcgtccgtcatcccgatgtg
gtggaagctgcagccgtcggcgtaccgagcgagatttcgggcgaagcggtgaaagtgttc
attgtccttcgtcccggtagtgcgctggaaacggaggcgctgattacccattgccgtcgc
tatctgacgggctataaggtgcctcgcctgttcgaattccgtgacgaattaccgaaatcg
agcgtcggtaaaatcctgcggcgtgaacttcggaatgagacgaaggcgtcctag
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