Lonsdalea populi: I6N93_08530
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Entry
I6N93_08530 CDS
T06954
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I6N93_08530 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpop01007
]
I6N93_08530 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpop03016
]
I6N93_08530 (thrS)
Enzymes [BR:
lpop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
I6N93_08530 (thrS)
Amino acid related enzymes [BR:
lpop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
I6N93_08530 (thrS)
Transfer RNA biogenesis [BR:
lpop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
I6N93_08530 (thrS)
Prokaryotic type
I6N93_08530 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
QPQ25854
LinkDB
All DBs
Position
complement(1952130..1954058)
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AA seq
642 aa
AA seq
DB search
MPVITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELTDATDLIESDAQLAII
TAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDHTLTQEDVELL
EKRMHELSNKDYDVIKKTANWQEARDTFVSRGEIYKVAILDENISHDDRPGLYHHEEYID
MCRGPHVPNMRFCHHFKLQKTSGAYWRGDSSNKMLQRIYGTAWADKKQLNAYLQRLEEAS
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTVFRELEAFVRLKLKEYKYQEVKGPFMMD
RVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGS
CHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRSEVNNCIKMVYDVYSTFGFEKVEVKL
STRPDKRIGSDETWARAEEDLAAALAENEIPFEYQPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDFSLPNRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPV
QVVIMNITDSQSDYVSELTQKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKE
VEAGKVAVRTRRGKDLGSLDVSEVISKLQQEIRSRSLHQLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttattacgcttcccgacggcagccagcgtcattatgaccacgccgtctcccct
cttgatgtcgccttggatatcggtccgggtctggcaaaagcttgtattgccggccgggtt
aatggtgaactgaccgatgcaacagatctgattgaatctgatgcgcaactggcgatcatc
acggcaaaggatgaagcgggtcttgaaatcattcgacactcctgcgcgcatttgctgggc
catgcaattaaacagctatggccggataccaaaatggccatcggtccggtgattgataac
ggtttctattacgatgtcgatttggaccatacgctgacgcaggaagacgtggaactgctc
gaaaagcggatgcatgagctgtccaataaagactatgacgttatcaagaagaccgcgaac
tggcaggaagcgcgcgatactttcgtatcacgcggcgaaatctataaagttgctattctg
gatgaaaacatcagtcacgacgaccgtccgggcctgtatcatcatgaagaatatatcgat
atgtgccgcggcccgcatgttcccaatatgcgtttctgccatcatttcaaactgcagaaa
acttctggtgcgtattggcgcggagacagcagcaataaaatgctgcagcgtatttacggt
actgcatgggcagataaaaaacagctgaatgcatatctgcagcggttggaagaggcgtct
aagcgtgaccatcgtaagattggtaagcagcttgatctgtatcatatgcaggaagaagcg
ccgggtatggtgttctggcacaatgacggctggacggttttccgtgagctagaagcgttt
gttcgcctcaagctgaaagagtacaagtatcaagaagttaaaggtccgttcatgatggac
cgcgtactgtgggaaaaaaccggccactgggacaattataaagacgcgatgtttaccacc
tcgtctgaaaaccgtgaatattgcatcaagccgatgaactgcccgggtcacgtacagata
ttcaatcagggattgaaatcttaccgggatctgccactgcgtatggctgagttcggtagc
tgccatcgtaacgagccttcgggttctctgcatggcttgatgcgcgttcgtggatttact
caggatgatgctcatatcttttgtacggaagatcaggttcgttctgaagtaaataactgt
attaaaatggtttatgatgtgtatagcaccttcggttttgaaaaagtcgaggtgaaattg
tctacccgtccggataaacgtatcggctctgatgaaacgtgggcccgtgcggaagaagat
ctggcggcggcgctggctgaaaatgagatcccattcgaatatcagccgggagaaggggcc
ttttacggtccgaaaatcgagtttactttacatgactgcctggatcgtgcgtggcagtgt
ggtactgtacagctcgacttttcgttgccgaaccgtctaagtgcgtcttacgttggcgaa
aacaacgaacgtcaggtcccggtcatgattcaccgggctatactaggttcaatggagcgc
tttatcgggattcttaccgaagaatttgcgggattcttcccgacctggttggctccggta
caggtggtgattatgaatatcaccgatagtcagtctgattatgtcagcgaattgacacaa
aaattgcaagaagcgggcattcgcgtcaaagcagacttgagaaatgagaagattggcttt
aaaatccgcgagcacacattgcggcgtgttccctatatgctggtctgtggcgataaagaa
gtggaggcaggtaaagttgctgtccgcacacgccggggcaaagatttggggagtctggat
gtcagcgaagttatcagtaagctgcaacaagagattcgcagccgtagtcttcatcaattg
gaggaataa
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