Lonsdalea populi: I6N93_09165
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Entry
I6N93_09165 CDS
T06954
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpop03009
]
I6N93_09165
Ribosome biogenesis [BR:
lpop03009
]
Prokaryotic type
ribosomal protein modification factors
I6N93_09165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QPQ22874
LinkDB
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Position
2085917..2087677
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQQLQDLGFSIEEASWLNPVPNVWSVHIRDRDCALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFYLGQSIADGDFVHYPDEKWFALPEDDTLPKG
ILDERLRAFYDPEQELAASDLIDLQSGNAERGICALPFTRQSDLLTVYIPVNIIGNLYVS
NGMSAGNSANEARVQGLSEVFERYVKNRIIAEAISLPKIPAEVLSRYPGVVEAIVTLEQE
GFPIFAFDASLGGKYPVISVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDNDEVAEHTNLETHFIDSSGLISWDLFKEESDYAFNDWDFSGTTAQEFATLM
DIFRAEDKEVYVADYKHLSVYACRILVPGMSDIYPAEDLLLANNSMGAHLRETLLALPDS
QFEPEDYLALLQQLDDEGLDDFTRVRELLGIATGKDNGWFTLRVGELKSMLALAGGDLEQ
ALSWVEWTQDFNQSVFSHEHSNYYRCLQTLLELALESEREAAQYYDALVKMYGQDTVEQA
SAAIAGESCFYKLFSVDASLTTLPAHQSLLAAYEKLQQAKRKHWHA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacgttcatcccaggcaaagacgccgccctggaagactccatcgcccgcttt
caacagcagctccaagacctggggttcagcatcgaagaagcctcgtggctgaatccggtg
ccaaacgtctggtccgtccatatccgcgaccgtgattgcgcgctatgtttcaccaatggc
aaaggcgcaacgaaaaaagcggcgttggcttctgcgctcggtgaatatttcgagcgcctg
tccaccaactatttctttgccgatttttacctgggtcaatctatcgctgacggcgacttc
gtccattatccggacgaaaaatggttcgccctgccggaggacgacacgctgccaaagggt
atcctcgatgagcggctgcgcgcgttctatgatccagaacaggaactggccgcgagcgac
ctgatcgatttgcagtccggcaacgccgaacgcggtatctgcgcgctgcctttcacgcgc
cagtccgatctcctgacggtctatattccggtcaacattatcggcaacctttatgtttct
aacggaatgtctgcgggcaatagcgctaacgaagctcgcgtgcagggcctttccgaagtg
tttgagcgctacgtgaaaaacagaatcatcgcggaagccatcagcctgccgaaaatcccg
gcggaggtgctgtcccgctatccgggcgtcgtcgaagccatcgtcacgctggagcaggaa
ggttttccgattttcgcctttgacgcttcgctaggcggcaaatatccggtgatcagcgta
gtgttgtttaacccggccaacggcacgtgtttcgcttccttcggcgcacaccccgacttc
ggcgtcgctctggagcgcaccgtcactgagctcctgcagggacggggcctgaaagatctg
gatgttttcaccccgccgactttcgacaatgatgaagtcgccgaacatactaacctggag
acgcactttatcgattccagcggtttgatctcctgggatctctttaaagaagagtcagac
tacgcctttaacgactgggatttcagcggtacgaccgcgcaggaatttgcgacgttgatg
gacatcttccgcgcggaagataaggaagtgtatgtcgccgattacaagcatctttccgtg
tacgcctgccgtattctggtgccagggatgtccgatatttatcccgctgaagatctgctg
ctggcgaacaacagcatgggcgcgcatctgcgcgaaacgttgctggctttacctgacagt
caatttgagccggaagattatctggcgctgctgcaacagctcgacgacgaagggctggac
gactttactcgcgtgcgcgaactgttaggtattgcgaccggcaaagataatggctggttc
acgctgcgtgtcggagaacttaaatccatgctggcgctggcggggggcgatctggaacaa
gcgctaagttgggtcgagtggacgcaggatttcaaccaatcagtcttcagtcatgagcac
agcaactattatcgctgcctacaaaccctgctggaactggcgctggaatctgaaagagag
gctgcgcaatattacgacgcattggtcaagatgtacggtcaggataccgttgaacaggcc
agcgcggccatcgccggtgaatcctgcttctataagcttttctctgtcgatgcctcactg
accactttgccagcccatcagtctctactggccgcctatgaaaagctgcagcaagccaaa
cgcaaacactggcacgcctaa
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