Lonsdalea populi: I6N93_09365
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Entry
I6N93_09365 CDS
T06954
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00550
Peptidoglycan biosynthesis
lpop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I6N93_09365
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpop01002
]
I6N93_09365
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpop01011
]
I6N93_09365
Enzymes [BR:
lpop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I6N93_09365
Peptidases and inhibitors [BR:
lpop01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
I6N93_09365
Peptidoglycan biosynthesis and degradation proteins [BR:
lpop01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
I6N93_09365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
QPQ25865
LinkDB
All DBs
Position
complement(2133393..2134580)
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AA seq
395 aa
AA seq
DB search
MRFPRLQAGIASLIFVTIFPVAAEQAPPAPQIDAKAYILMDFHSGQVLAESQADERLDPA
SLTKIMASYMIGQAVKAGKIKTTDVVTVGKDAWATGNPALRGSSLMFLKPGDQIAVSELN
KGIVIQSGNDASIALADYVAGSQDAFVGLMNQYVNALGLTNTHFLTVHGLDAEGQYSTAR
DMALLSRALIRDVPDEYALHKEKSFTFNNIRQMNRNRLLWSSNLAVDGVKTGHTNGAGHN
LVASATQGEMRLISVVLGAPTDAVRFRESEKLLTWGFRFYDTVTPVRSDTVLTTQRLWFG
ESPQARLSVAEDAALSVPKGQGKNLRASFTLNSPPLTAPLKKGQAVGTVDFQLDGKSIAQ
RPLVAMDDVPEAGFFSRMWDAVLMKLNQWFGGLLG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttccccgtttacaggctggcattgccagcctgatcttcgtaacgatattccct
gtggccgcggaacaagcgccgcctgcgccgcagatcgacgccaaagcctatatcctcatg
gatttccatagcgggcaggtgctggccgaatcccaggcggatgagcggctcgatcccgcc
agtctgaccaagatcatggccagctatatgatcgggcaggcggtgaaagccggcaaaatc
aaaaccaccgatgtggtgaccgtcggaaaagatgcctgggcgaccggcaatccagcgctg
cgcggttcctcgctgatgttcctaaagcccggtgatcagattgcggtctcagaactgaat
aaaggcatcgtcattcagtccggcaacgatgccagcatcgcgctggcggactatgtggcg
ggcagtcaggacgcatttgtcgggctgatgaaccagtacgtcaacgcgctggggttgacc
aacacgcatttcctgaccgtccacggtctggatgcggaggggcaatacagcactgctcgg
gatatggcgctgcttagtcgggcgctgattcgggacgtgcccgacgaatatgctctgcac
aaagagaagtctttcaccttcaacaatatccgccagatgaaccggaaccgtctgctgtgg
agcagcaatctggcggtggacggagtgaagaccggtcataccaacggcgcaggccataat
ttggtggcttcggccacgcaaggcgagatgcgtcttatatccgttgtgctgggcgccccg
accgacgccgtgcgctttcgcgaaagtgagaaattgctgacctggggattccgattttac
gacacggtcacgccggtacgcagcgatacggtactgacgacccagcgtctatggttcggt
gaaagcccacaggcacggttgagcgtggctgaagacgccgcgctcagcgttcccaaagga
cagggcaaaaatctgcgggccagcttcacgctcaattcaccaccgctgacggcgccgctg
aaaaaagggcaggccgtggggacggtcgactttcaactggacgggaaatccatcgcccag
cgtccgctggtggcgatggacgatgtgccggaagccggattctttagccgcatgtgggat
gcggtgctgatgaagctgaatcagtggtttggcggtctactggggtga
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