Lonsdalea populi: I6N93_09390
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Entry
I6N93_09390 CDS
T06954
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpop03009
]
I6N93_09390 (rimO)
Enzymes [BR:
lpop01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I6N93_09390 (rimO)
Ribosome biogenesis [BR:
lpop03009
]
Prokaryotic type
ribosomal protein modification factors
I6N93_09390 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QPQ25866
LinkDB
All DBs
Position
2138385..2139728
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AA seq
447 aa
AA seq
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MTQQKTGGDKPQGNKIGFVSLGCPKNLVDSERILTELRTEGYQVVPSYHDADLVIVNTCG
FIDSAVQESLETIGEALNENGKVIVTGCLGAKENQIREVHPNVLEISGPHSYEQVLSHVH
HYVPQPEHNPFTSLVPESGVKLTPRHYAYLKISEGCDHRCTFCIIPSMRGKLDSRPVGSV
LDEAKRLADAGVKELLVISQDTSAYGTDIKHRTGFWNGQPVKSSMVSLCEQLATLGIWVR
LHYVYPYPHVDEVIPLMAEGKILPYLDIPLQHASPKVLKLMKRPGAVERTLERIKRWREI
CPALTLRSTFIVGFPGETEEDFQMLLDFLKEAQLDRVGCFKFSPVEGATANALPDPVPEE
IKEERYHRFMQLQQQISAQRLQAKIGLELPVLIDEVDEDGAIGRSMADAPEIDGAVYLND
ETRLKPGDIVTVKIEHADEYDLWGSRV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ctgacccagcaaaagaccggcggcgacaagccgcagggcaataaaatcggttttgttagc
ctgggctgccctaaaaacctggtggattccgagcgcatccttacagagctgcgcaccgaa
gggtatcaggtggtgccaagctatcacgatgccgatctggtgattgtcaacacctgcggc
tttatcgacagcgccgtgcaggaatcgctggaaaccatcggcgaagcgttgaatgaaaac
ggtaaggtcatcgtcaccggctgtcttggcgcgaaagagaatcaaatccgcgaagtgcat
cccaatgtgctggaaatcagcgggccgcacagctacgagcaggtgctgtctcacgtccat
cactatgtgccgcagccggagcacaacccgttcaccagcctggtgccggaatccggcgtg
aagctgacgccgcgtcactacgcctaccttaagatttccgaaggctgcgaccatcgctgc
actttctgcatcatcccctcgatgcgcggcaagctggatagccgccctgtcggctctgta
ttggatgaagctaaacgtctggccgacgccggggtgaaagagctgctggttatctcgcag
gatacctccgcctacggcaccgacatcaaacaccgcaccggcttctggaatggtcagccg
gtcaagtccagcatggtcagcctgtgcgagcagttggcgacgctgggcatttgggtccgt
ctccactacgtctacccttacccgcacgtcgacgaggtgatcccgctgatggctgaaggc
aagattctgccgtatctggatatcccgctacagcacgccagcccgaaagtgttgaagctg
atgaaacgccccggcgccgtcgaacgcacgctggagcgcattaaacgctggcgcgagatc
tgcccggcgctgacgctgcgctcaaccttcatcgtcggcttccccggcgaaacggaagaa
gacttccagatgttgctggacttcctgaaagaagcacagctggatcgcgttggctgcttc
aaattcagcccggtggaaggcgctaccgccaatgcattgcccgacccggtgccggaagag
atcaaggaagagcgctaccaccgatttatgcaactgcagcagcagatttccgcgcagcgt
ctgcaggcgaaaatcggcctggaactcccggtgctgatcgatgaagtggatgaagacggt
gccattggccgcagcatggccgacgccccggaaatcgacggcgcggtctatctaaacgat
gaaacacgcctcaaacccggcgatatcgtcaccgtgaaaattgaacacgccgacgaatac
gacctatggggcagccgggtctaa
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