Lonsdalea populi: I6N93_09945
Help
Entry
I6N93_09945 CDS
T06954
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lpop
Lonsdalea populi
Pathway
lpop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6N93_09945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_09945
Transporters [BR:
lpop02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I6N93_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
HrpJ
Motif
Other DBs
NCBI-ProteinID:
QPQ23010
LinkDB
All DBs
Position
complement(2261422..2262933)
Genome browser
AA seq
503 aa
AA seq
DB search
MNRLIKQTGLLLAGAVMATTAQAAELRIGLQDDPDVLDPAQSRTFVGRIIYTSLCDRLVD
VDNTLSIIPQLATQWTWGDGGKTLTMDLRQGVVFHDDTPFNAEAVVYNIQRYMTMPESRR
KSELASVARVEAIGEYQVKFTLKSPDASLLAQLSDRAGTMISPTAGKRLGANFGSDPICS
GAFKFVQRVQQDRIVLEKFPRYWNAGNIFLDKVTFLPIPDTTVRLANLQSGELDLAERIS
ASDVAAVQQNPNLNYGKVIGPGYMALYVNIGNGPQANTPFGKDKRLRQAFSLSIDREAIN
QVVFEGTALAGNQPWPSTSPGYNQHLPVPARDVAKAKALMKAAGYEKYDIELQHANNTTQ
TQMMQVIQSMAAEAGFNVKLKATEFATLLSEQTAGNYVLSRSDWSGRSDPDGNIHPFVTC
DGGINDTKYCNPEVDKLLNEARESTDNAVRKARYDAAIKILDNDLPLIYLGHQAYLYAYA
KKIAGFTPSADGMIRLTGVKKGN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacttattaaacagaccgggctcttgctggccggtgcagtgatggcgacgacg
gcgcaggcggcagaattacgcatcggcctgcaagacgacccggacgtgctggacccggcc
cagtcgcgcacgtttgtcgggcgtattatctacaccagcctgtgcgatcggttggtggac
gtcgacaacacgctgtcgattattcctcagctggcaacgcagtggacgtggggcgacggc
ggcaaaacgttgaccatggatctgcgccagggcgtggtgttccacgatgacacgccgttt
aacgcggaagcggtggtgtacaacatccaacgctacatgacgatgccggagtcccgccgc
aaaagcgagctggcctccgtcgcccgcgtggaggcgatcggcgaatatcaggtgaaattc
acgctgaaaagccccgacgccagcctgctggctcagctgtccgatcgcgcgggcacgatg
atctccccgacggcgggcaagcggctcggggccaattttggttcggatcccatctgctcc
ggcgcgtttaaattcgtgcagcgcgtccagcaggaccgcatcgtgcttgagaaatttccc
cgctattggaacgccggcaacatctttctcgataaggtcaccttcctccctatcccggat
acgacggtacggttagccaacttgcagtccggcgagctggatctggccgagcgtatctcg
gcgtcggatgtcgccgccgtgcagcagaacccgaacctgaactacggcaaggtcatcgga
ccgggctatatggcgctgtacgtcaatatcggcaacggaccgcaggcaaacacccccttc
ggcaaggacaaacggctgcgtcaggccttctcgctctctatcgaccgggaagcgatcaat
caggtggtcttcgagggcacggcgcttgccggcaatcagccgtggccgtccaccagccct
gggtataaccagcatctgccggtcccggcgcgggacgtggcgaaggccaaggcgctgatg
aaggcggcgggctatgagaaatacgatatcgaactccagcacgccaacaacaccacgcag
acccagatgatgcaggtgatccagtccatggcggccgaagcgggtttcaacgtcaaactg
aaagcgaccgagttcgccacgctgctctccgaacagacggcggggaactacgtgctgtcg
cgctccgactggtccggccgttcggatccggacggcaatattcacccgtttgtgacctgc
gacggcggcatcaacgacaccaaatactgcaatcctgaggtcgacaagctgctgaacgaa
gcgcgcgaatccacggataacgcggtgcgtaaagcccggtacgacgccgcgattaagatt
ctggacaacgatctgccgctgatctatctcggccatcaggcctacctctatgcctacgcc
aaaaaaatcgccggatttacgccgtccgccgacgggatgatccgcctgacgggcgtcaaa
aaaggcaactaa
DBGET
integrated database retrieval system
