Lonsdalea populi: I6N93_10130
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Entry
I6N93_10130 CDS
T06954
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
lpop
Lonsdalea populi
Pathway
lpop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6N93_10130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_10130
Transporters [BR:
lpop02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
I6N93_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Glyco_hydro_62
Motif
Other DBs
NCBI-ProteinID:
QPQ23038
LinkDB
All DBs
Position
complement(2304611..2305765)
Genome browser
AA seq
384 aa
AA seq
DB search
MEKYHARTSLSAICLSVLCALNIAHATAPELSAQGEGRLDIVAWPGYIERGQSDENYDWV
TQFEQETLCQVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIYGKRVQPIEPAAIPN
WKSIDPRLINAPWYTVGGKIYGTPYQWGPNLLMYNTTVFPTPPESWSVVFTAQTLPDGKT
NQGRVQAYDGPIYIADAALYLKSTQPELGISDPYQLTEPQYQAVLTLLRSQRALVHRYWH
DTSVQMSDFKNEGVAASSAWPYQANALKSEGQPIATVLPKEGVTGWADTTMLASDAKHPV
CAYKWMNWSLLPKVQGDIAAWFGSVPAVPAACKGNALLGAEGCENNGATQFDKIAFWKTP
QSEGGKYVPYSRWTQDYIAIMGGR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatatcatgccaggacatcattgtccgctatttgcctgagcgtcttgtgtgcg
ttaaatatcgcccacgcgaccgcgccggaattatctgcccaaggggaaggccgtctcgat
atcgtcgcctggcccggttacatcgaacggggtcaaagcgatgaaaactacgattgggtc
acgcagttcgaacaggaaactctctgccaggtcaatgtcaaaaccgcggcgacctcggac
gaaatggtcagcctgatggcaaagggcggatacgatctggtcacggcctccggcgacgcc
tcgctgcggctgatctatggcaagcgtgtccagccgattgagcctgccgctattcccaac
tggaaaagcatcgacccgcggctgatcaacgcgccgtggtacacggtcggcggcaaaatc
tacggcactccgtatcaatggggccccaatctcctgatgtacaacacgacggtgttcccg
acgccgccggaaagctggtcggtggtattcactgcgcagacgttgcccgacggtaagacg
aatcaggggcgggtgcaggcttacgacggcccgatctacattgccgatgctgcgttgtac
ctgaaaagcacgcagccggagctgggcatttcagacccgtatcaactaacggagcctcag
tatcaggcggttctgacgctgttacgcagccagcgcgcgctagttcatcgctattggcac
gacacctccgtgcagatgagcgacttcaagaatgaaggcgtggcggcatccagcgcctgg
ccgtatcaggcgaatgcgctcaagagcgaggggcaacccatcgccaccgtgttgccgaag
gagggcgtgaccgggtgggctgataccaccatgctagcgtcggacgccaaacatccagta
tgcgcttacaaatggatgaactggtcattgctgcccaaagtgcagggcgatatcgccgcc
tggttcggctccgtaccggccgtgccggccgcctgtaaaggcaatgcactgctgggtgcc
gaagggtgtgaaaataacggcgcgacgcagttcgataaaattgcgttctggaaaacgccg
cagtccgaaggcgggaaatatgtcccctatagccgctggacgcaggattatattgccatt
atgggcgggcgttga
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