Lonsdalea populi: I6N93_11685
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Entry
I6N93_11685 CDS
T06954
Symbol
mdtC
Name
(GenBank) multidrug efflux RND transporter permease subunit MdtC
KO
K07789
multidrug efflux pump
Organism
lpop
Lonsdalea populi
Pathway
lpop02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6N93_11685 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_11685 (mdtC)
Transporters [BR:
lpop02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I6N93_11685 (mdtC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QPQ23314
LinkDB
All DBs
Position
2665570..2668650
Genome browser
AA seq
1026 aa
AA seq
DB search
MKLFALFIHRPVATTLLALAIALCGVLGFRLLPVSPLPQVDFPVISVSASLSGASPETMA
SSVATPLERSLGRIAGITEMTSMSSLGSTRIILQFELDRDINGAARDVQAAINAAQSLLP
SGMASRPTYRKVNPSDAPIMIMTLTSDTYSPSQLYDIAINQVYPRISQLEGVGDITIGGS
SLPAVRISLNPLALFNQGVSLDKVREAIDNANVRLPVGSVNDNTTHWQIETNDELKTAKV
YRPLIVHYNNGAPVRLSDVAKVEDSVQDTLNAGMTNGEPAVLVIIRRAPEANIISTVDSI
RAALPELSATLPASVHLNVAQDRTPTIRASLAEVEQALVIAVALVILVVYLFLRSGRATL
IPAAAVPISLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENTARHIEAGIRP
MQAAIQGVREVGFTVVSMSVSLIAVFIPLLLMDGLSGRLFREFAVTLCVAIIISLVVSLT
LTPMMCARLLRPHAPRSQPRRRGFNRVLLALQGRYALSLNGVLARARWVVLVLFGTIGLS
VWLYVDMPKTLFPEQDTGRIMGFVQGDQSISFQAMKIKMQDLMKTISSDPAVDNVTGFTG
GNRTNSGSMFISLKPLAERGASSQQIIARLRSKLAQEPGASLFLMAVQDVRMGGREANAS
YQYTLLSDDLSALRQWEPKIRAALAERPELADVSSDQQDKGAELALTYDRDTLAQLGISV
SDINALLNNAFGQRQISTLYQPLNQYKVVMVVDPVYAQDATALNQMFVINSEGKAIPLSY
FARWLPANAPLSVNHQGLSAAATISFNLPPNASLSDATFAIERTMTALGVPSNVRGQFAG
TALAFQQSQSSQVALIIAAIVTVYIVLGMLYESYVHPLTIISTLPSAGVGALLALKLFDK
PFSLVALIGIMLLIGIVKKNAIMMVDFALVAQRTQNLSARDAIFQACQLRFRPIFMTTLA
ALLGALPLVISSGDGAELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLSQRRARRTV
TLPESL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttcgcgctgtttattcatcgtcccgtcgcgaccacgctgctggcgctggcg
attgcgctgtgcggggtactcggcttccgactgctgccggtctcgccgctgccgcaggta
gacttcccggtaatctcggtctcggcctcgctgtcgggcgcctcgccggaaaccatggca
tcctcggtggcgacgccgctggagcggtcgctcggccgcatcgcgggcatcaccgaaatg
acctccatgagttcactcggcagcacccgcattattctgcagtttgagctggatcgtgat
atcaacggcgccgcccgcgacgtgcaggccgccatcaacgccgcccagagtctgctgccc
tcaggcatggccagccgccccacctaccgtaaggtgaacccgtcagacgcgccgatcatg
attatgacgctgacctcggacacctactcccccagccagctgtacgatatcgccatcaat
caggtctatccgcgcatttcacagctggagggcgtgggcgatatcaccatcggcggcagt
tcgctcccggcggtgaggatatcgcttaacccgctggcgctatttaaccaaggcgtatcg
ctggataaagtccgtgaggcgatcgataacgccaacgtgcgcctgcccgtcggcagcgtg
aatgacaacacgacgcactggcagattgaaaccaacgacgagctgaagacggcgaaggtc
taccgtccgctcattgttcactacaacaacggcgcgccagtgcggctcagcgacgtcgcc
aaagtcgaagactccgtgcaggacacgctcaacgcggggatgacgaacggcgaacccgcc
gtgctggttattatccgccgcgcgcccgaagccaacatcatctccaccgtcgacagcatc
cgcgccgcgttacccgaactgagcgccacgctgcccgcatccgtgcatttaaacgtcgcg
caagaccgcactcccacgattcgcgcgtcgctggcggaggtggagcaggcgctggtcatt
gccgtcgcgctggtgattctggtggtgtacctgttcctgcgctccgggcgcgccacgctg
atcccggcggcggcggtgcctatttcgctgatcggcacgttcgccgccatgtatctgtgc
ggtttcagcctgaacaatctgtcgttgatggcactgacgatcgccaccggcttcgtggtg
gacgacgccatcgtggtgctggaaaacaccgcccgtcatatcgaagcgggcatcaggccg
atgcaggcggcgatacagggcgtgcgcgaagtcggtttcaccgttgtctccatgagcgtg
tcgctgatcgccgttttcattccgctactgctgatggacgggctgtcggggcgactgttt
cgtgaattcgccgtcaccctgtgcgtggcgatcatcatttcgctggtggtctcgctcacc
ctgacgccgatgatgtgcgcgcgcctgctgcgtccgcacgccccacgcagccagccgcgc
cgccggggattcaatcgcgtattgctcgccttgcaggggcggtatgcgctgtcgctgaac
ggagtattggcgcgcgcgcgctgggttgtgctggtcctgttcggcactatcggcctgagc
gtctggctctatgtcgacatgccgaaaaccctgttcccggagcaggataccggccggatt
atgggcttcgtgcagggcgaccagagcatctcgttccaggccatgaagatcaagatgcag
gatctcatgaaaaccatcagcagcgatcccgccgtggacaacgtgaccggttttaccggc
ggcaaccggaccaatagcgggtcaatgttcatcagcctgaaaccgctggcggagcgcggc
gccagctcgcagcaaatcatcgccaggctgaggtccaaactggctcaggaaccgggcgcc
agcctgttcctgatggcggtgcaggatgtgcggatgggcggccgcgaggctaacgccagc
tatcaatacacgctgttgtctgacgatttgagcgcgttgcgccagtgggagccgaaaatc
cgcgcggcgctggctgaacggccggagctggcggacgtcagttcagaccagcaggacaaa
ggcgcagaactggcgctgacctacgaccgcgatacgctggctcagctcggcatcagcgtg
tcggatatcaacgccctgctcaacaacgccttcgggcaacggcagatctccaccctctat
cagccgctgaaccagtacaaggtggtgatggtggtcgatccggtgtatgcgcaggacgcc
accgcgctgaaccagatgttcgttatcaacagcgagggcaaggcgatccccctgtcctat
ttcgcccgctggctgcccgctaacgcgccgctgtcggtcaaccatcaggggctgtccgcc
gcggcgacgatctccttcaacctgccgccgaacgccagcctgtccgatgcgaccttcgcc
attgagcgaaccatgaccgcgctcggcgtgccttccaacgtccgcggccaattcgccggc
accgcgctggcgttccagcagtcgcagtcgtcgcaggtggcgctgatcatcgccgccatc
gtcacggtgtatatcgtgctggggatgctgtacgaaagctacgtacacccgctgaccatc
atctccaccctgccgtcggcgggggtgggcgcgctgctggcgctgaagctgttcgataag
ccgttcagcctggtcgcgctcatcggcattatgttgctgatcggcattgtgaaaaagaac
gccatcatgatggtggacttcgcgctggtcgcgcaacggactcagaacctcagcgcgcgc
gatgcgatatttcaggcctgccagctccgcttccgcccgatttttatgaccacactggcc
gccttgctcggcgcgctgccgctggtaataagcagcggcgacggcgcggagctgcgccag
ccgctggggatcaccatcgtcggcgggctggtcatgagtcagctgctgacgctctatacc
acaccggtggtttacctgttctttgaccggctgtcccagcgacgcgcacgccgcacggtg
acgctgccggagtcactctga
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