Lonsdalea populi: I6N93_11775
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Entry
I6N93_11775 CDS
T06954
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lpop
Lonsdalea populi
Pathway
lpop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I6N93_11775 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpop03400
]
I6N93_11775 (xseA)
Enzymes [BR:
lpop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I6N93_11775 (xseA)
DNA repair and recombination proteins [BR:
lpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I6N93_11775 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPQ23328
LinkDB
All DBs
Position
2690579..2691934
Genome browser
AA seq
451 aa
AA seq
DB search
MPQCPSSAIFTVSRLNQTVKQLLESEMGHIWLSGEISNFSQPSSGHWYFTLKDERAQVRC
AMFRGSNRRVTFRPQNGQQVLIRAMITLYEPRGDYQLLTDSMQPAGDGLLQQQFEQLKQR
MSAEGLFDQQFKQRLPKPARRVGVITSASGAALHDILQVLKRRDPLLPVIIYPTSVQGAD
ASPQIIRAIELANLRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQMELLRQVTTQRQRLEMAMDYSLAQRQSLFTLLH
HRLQQQHPQLRLARQQNRLIRLRQRLDDALQLRLRQSSRRQESLQQRLRQQPPQPRLHRA
QQHIQQLHYRLQHALDKQIGQNKQRFGESCSHLQAVSPLATLGRGYSVTTTPSGEVLKKA
GQIAAGDTLSTRLQDGWVESRVTAVHPADKA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccacagtgcccttctagcgccatttttaccgtcagccgcctcaatcaaacggtcaaa
caactgctggaaagcgagatgggccatatctggctcagcggcgaaatctccaacttttcc
cagccgtcatccggccactggtacttcacgctgaaagacgagcgcgctcaggttcgctgc
gcgatgttccgcggcagcaaccggcgggtcaccttccggccgcagaacggtcagcaggtg
ctcatccgcgccatgattacgctgtatgaaccgcgaggcgactaccaattgttgacggat
agcatgcagcccgccggcgacggcctgttgcagcagcagttcgaacagttgaaacagcgg
atgtccgccgaggggctgttcgaccagcagttcaagcagcggctgccgaagccggcccgg
cgcgtcggggtgatcacctccgccagcggcgcggcgctgcatgacatcctacaggtgctg
aagcgccgagatccgttgctgccggtcatcatctatccgacttccgtgcagggcgcagac
gcgtcgccgcaaatcatacgcgccatcgaactggctaacctacgcgacgagtgcgatgtc
ctgatcgtcggccgcggcggcggctcgctggaagatctctggagcttcaacgacgaacgc
gtcgccagagcgattttcgccagccgcattcctatcgtcagcgccgtcggccatgagacg
gacgtcaccatcgccgatttcgtcgcggatttacgcgccccgacgccttccgccgccgct
gagttggtcagccgtaaccagatggagctactgcgtcaggtgacaacccagcgccaacgg
ctggaaatggcaatggattactctctggcgcagcgccagagcctgttcacccttctgcac
caccgcctgcaacaacagcatccccagttgcggctggcgcgccagcaaaaccggcttatc
cgcttacgtcagcgactggacgacgccttgcagctcagactgcgccaaagctcgcgcagg
caggagtccctccagcaacggttgcggcaacagccgccgcagccgaggctccatcgcgcg
cagcaacacattcagcagttgcattaccggttgcaacatgcgctcgataaacaaatcggt
cagaataaacagcgcttcggcgagtcctgttcccatctgcaagcggtcagcccgctggct
acgctgggtcgaggctatagcgtcaccaccaccccatcgggcgaagtcttaaaaaaggcg
ggtcagattgccgccggagacactctcagcacacggctgcaagatggatgggtcgaaagc
cgggttacggccgttcatcccgccgacaaggcctga
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