Lonsdalea populi: I6N93_11900
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Entry
I6N93_11900 CDS
T06954
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00260
Glycine, serine and threonine metabolism
lpop00460
Cyanoamino acid metabolism
lpop00630
Glyoxylate and dicarboxylate metabolism
lpop00670
One carbon pool by folate
lpop00680
Methane metabolism
lpop01100
Metabolic pathways
lpop01110
Biosynthesis of secondary metabolites
lpop01120
Microbial metabolism in diverse environments
lpop01200
Carbon metabolism
lpop01230
Biosynthesis of amino acids
lpop01240
Biosynthesis of cofactors
lpop04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I6N93_11900
09102 Energy metabolism
00680 Methane metabolism
I6N93_11900
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I6N93_11900
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
I6N93_11900
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I6N93_11900
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
I6N93_11900
Enzymes [BR:
lpop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
I6N93_11900
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QPQ23352
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Position
complement(2716687..2717940)
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWQAMQQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGAPVNLSGKLYKVIPYGIDETGKIDYDEMAELARTHKPKMIVGGFSAYSGV
VDWAKMREIADSVGAYLFVDMAHVAGLVAAGVYPTPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPGFTVYQQQVAKNAKAMVE
VFLSRGFNVVSGGTQNHLFLLDLVSKDITGKEADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGTPSATRRGFKEAEVRELAGWICDVLDNINDEAVIERTKQKVLELCARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgagctgtggcaggctatgcag
caggaagtagtgcgtcaggaagaacacattgagctgattgcttcagaaaactacaccagc
ccacgcgtcatgcaggcccagggatctcaactgaccaacaagtatgcggaaggatacccg
ggcaaacgctattacggcggttgcgaatatgtcgatatcgtcgagcaactggccattgat
cgtgcgaaagcgctgtttggcgcggactacgctaacgttcagccgcactcgggctctcag
gctaacttcgcggtttacaccgcgctgctgcagcccggcgataccattctgggcatgaac
ctggctcacggcggacacttgacgcacggcgcgccggttaacctgtccggtaaactgtat
aaagttattccttacggtatcgacgaaaccggcaagatcgactacgacgaaatggctgag
ttggcgcgtactcacaaaccgaaaatgatcgtcggcggcttttcggcttattccggggtg
gttgactgggcgaaaatgcgtgaaatcgctgacagcgtgggcgcttacctgttcgttgat
atggcgcatgtggctggtctggtcgccgctggcgtttaccctacgccggtgcctcatgcg
cacatcgtcaccaccactacgcacaaaacgctggcgggtccgcgcggcggcctgatcctg
gcgaaaggcggtgatgaagaactgtataagaaactgaactccgcggtattcccgggtggc
cagggtggtccgctgatgcacgtgattgcgggtaaagcggtagcgctgaaagaagcgatg
gagcctggttttaccgtttaccagcagcaggtagcgaaaaacgcgaaggcgatggttgaa
gttttcctttcgcgcggttttaacgtggtgtccggcggtacgcaaaaccacctgttcctg
ctggatctggtcagcaaagatattactggtaaagaagccgatgctgcgttgggtcgcgcg
aacatcaccgtcaataaaaacagcgtgccgaacgatcctaaaagcccgtttgtgacctcc
ggtgttcgtatcggtacgccatccgccacccgccgcggcttcaaggaagcggaagtgcgc
gaactggctggatggatttgtgacgtgctggataacatcaacgacgaagctgtgattgag
cgcaccaagcagaaagtgctggaactctgcgctcgcttccctgtttacgcctaa
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