Lonsdalea populi: I6N93_11985
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Entry
I6N93_11985 CDS
T06954
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lpop
Lonsdalea populi
Pathway
lpop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I6N93_11985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_11985
02044 Secretion system [BR:
lpop02044
]
I6N93_11985
Transporters [BR:
lpop02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
I6N93_11985
Secretion system [BR:
lpop02044
]
Type I secretion system
Adhesin protein transporter
I6N93_11985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
DUF87
AAA_29
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QPQ23367
LinkDB
All DBs
Position
2751253..2753436
Genome browser
AA seq
727 aa
AA seq
DB search
MMPQHEQPPGSTDAAASVNHDPRNRHDDPLLDSLLILCKLQGKSASRTTLTAGLPLAEQR
MTVELLPRAAARAGLQARVLKRPLNAISGMSLPAMLLMREGRSAILLGWNSDGSARIMPS
ETEGGEIVVDHSTLQQNYLGLVMFAQPRHSFDLQQTSLIPRTKSWFKDTLKLSRFLYMDA
ILASLLINIIALATPLFVMNVYDRVVPNQATSTLWVLALGVSGAFFFDLILRTLRSICLD
IAGKKTDLILSATLFERITGMAMKARPARVGSFAQNIHEFQLLRDFLSSLTLTTLIDFPF
TLLLLLVIGIIGGPLVWIPILAFPLALLVSWALQKPLTSTIEKSLHLASERQATLIETLT
GLDAIKVNNAESERQHQWEQTIGSLSRLEMRAKTLSSLAVNLTQWFQQLAGVIMIVVGVY
LLIDGKLSMGALIACYMLNGRALIPLGQLSGLVTRYQQAKLTMVTTEQMMELPQERKEDE
RPLKRENIIGGIEFRDVTFNYPEQKMLSLSNINLTIQPGEKVGIIGRTGSGKSSLEKLLV
NLYQPTSGNLLIDGVDSRQLDVSDLRHNIGYVPQDIQLFSGSLRDNLICGARYVEDEAML
RAAEIAGVSEFARLHPDGFNLQVGERGLQLSGGQRQAVAIARALLLEPPILVMDEPTSSM
DNSNEDRLKQALQSALINKTLLLVTHRVSMLSLVDRLIIMDKGRIIADGPKAIVMDALKK
GQINASR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgccacagcatgaacaaccacctggcagcaccgacgctgctgcttccgtaaaccat
gaccctcgcaatcgtcacgatgaccccctgcttgatagcctgttgatactttgcaaactt
cagggaaaatccgccagccgtactacgctgaccgccgggttgccgctcgcagagcaacga
atgacggttgaactgctgccgcgtgccgcagcgcgcgcaggactacaggcccgcgtgctc
aagcggccgctgaatgcgatctccggcatgtcgttgcccgcgatgctgctgatgcgagaa
ggccgctctgccatcctgctgggttggaacagcgacggcagcgcccgcatcatgcccagt
gaaaccgagggcggcgaaatcgtcgtcgaccatagtactttgcagcaaaactatctggga
ttagtgatgttcgcgcagccccgacattcgttcgatctgcagcaaacctcgttgatcccg
cgcacaaaatcctggttcaaggacacgctgaagctgtcccgcttcctgtatatggacgcg
attctcgccagcctgctcatcaacatcatcgcgctcgccaccccactcttcgtgatgaac
gtttatgaccgcgtggtacccaatcaggcgacgtcaacgctatgggtacttgccctcggc
gtcagcggcgctttctttttcgatctgatattgcgcacgctgcgcagtatctgtctggat
atcgcgggtaaaaaaaccgaccttatcctttccgccacgctgttcgaacgcatcaccggc
atggcgatgaaagcgcgtcccgcccgggtcggcagcttcgcgcaaaatatccatgaattt
cagctgctgcgggattttctgtcctcgctgacgctgaccacgctaatcgattttcccttt
actttgctgctgctgctggtcattggcatcatcggcggcccgctggtgtggatccccata
ctcgccttccctctggccttgctggtgagttgggcgctgcaaaaaccgctgacctcgacc
atcgaaaaatcgctgcatctggcgagcgaacgtcaggcaacgttgattgagacgctgacc
gggcttgatgcgattaaggtcaataacgcggaaagcgagcgccagcatcagtgggaacag
acgatcggcagcctcagccgtctggaaatgcgggcaaaaacgctctcttctctggcggtc
aacctgacccagtggttccagcagttggcgggcgtcatcatgatcgtcgtcggcgtttat
ctgttgattgacggtaaactgagtatgggtgcgctcatcgcctgctacatgcttaacgga
cgcgccttgattccgctgggacaactttccggtctggtcacccgctatcagcaggccaaa
ttgacgatggtgacgaccgagcagatgatggagctgccgcaggagcgcaaggaagacgaa
cgcccgctaaaacgcgaaaacatcatcggcggcattgagtttcgcgatgtgaccttcaat
taccccgaacagaagatgctttctctgtcgaacattaacctgaccattcagccaggtgag
aaagtcggcatcattgggcgaaccgggtcaggcaaaagttcgctggaaaaattactcgtc
aatctctaccaaccgaccagcggcaatctgctgatcgatggggtagactcgcggcagttg
gacgtcagcgatctgcgccacaacatcggttatgtcccgcaggatatccagctgttcagc
ggctcgctgcgcgataacctgatttgcggcgcacgctatgtagaagacgaagccatgctg
cgcgccgccgaaatcgccggcgtcagcgagttcgcccggcttcatcccgacggcttcaac
ctgcaggtcggcgagcgcggtttacagctctcgggcggccaacgtcaagccgtggccatt
gcacgcgccctgctgctggagccgccgattctggttatggatgaacccaccagctccatg
gataacagcaacgaagatcgcctcaagcaggctctgcaatccgcattgatcaacaagacg
ctgctgctggtgacgcaccgcgtgtccatgctgtcgctggttgaccgcctgatcatcatg
gataaaggccgcattattgccgacggtccgaaagccatcgtgatggatgcattaaagaag
gggcagatcaatgcgtctcgttga
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