Lonsdalea populi: I6N93_12020
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Entry
I6N93_12020 CDS
T06954
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lpop
Lonsdalea populi
Pathway
lpop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6N93_12020 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpop03400
]
I6N93_12020 (recO)
DNA repair and recombination proteins [BR:
lpop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I6N93_12020 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I6N93_12020 (recO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
EAD7
Motif
Other DBs
NCBI-ProteinID:
QPQ23373
LinkDB
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Position
complement(2760345..2761079)
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AA seq
244 aa
AA seq
DB search
MEGWQRAFVLHGRPYSETSLLLDLFTENQGRVRILAKGARARRSSLKGCLQPFTPLLVRW
SGRGDVKTLRNAEPVSLALPISGSTLYSGLYVNELLTRVLEFETNFSALFFDYLHCLQQL
AALDGSPEPALRRFELALLGHLGYGVDFLHCSGSGEGVADDMTYRYREEKGFIASLVVDR
LSFTGRELRSLAAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVIKPPEPAQ
SQEE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctggcagcgcgcatttgtcttgcatgggcgcccttacagtgaaaccagcctg
ctgctggatctgttcacggagaatcagggccgtgtgcggatattggcgaaaggcgcccgg
gcgcggcgttccagcctgaaaggatgtcttcagccgttcacgccgctgctggtacgctgg
agcggccggggtgatgtcaaaacgcttcgcaatgccgagccggtttctctggctcttccc
atcagcggtagtacgctgtacagcggcctgtacgttaacgaactgctcactcgggttctc
gagttcgaaaccaacttctccgcgctgttcttcgattacctgcactgtctgcaacagctg
gccgcgctcgacggctcgcctgaaccggcgttgcgtcgcttcgagctggcgctgctgggg
catttgggatatggcgtcgactttcttcactgctccggcagcggcgagggcgtcgcggac
gacatgacctatcgctatcgggaagagaaagggtttatcgccagtctggtggtggaccgc
ctcagttttaccggacgcgaacttcgctcgctggcggctagggagttccccgatgcggac
acgttgcgcgccgccaaacggttcacccgcatggcgcttaaaccctacctcggcggtaaa
ccgctcaagagccgcgagctgttccgacagtttgtgatcaaaccgcccgagcctgcacag
tcgcaagaagagtaa
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