KEGG   Lonsdalea populi: I6N93_12030
Entry
I6N93_12030       CDS       T06954                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lpop  Lonsdalea populi
Pathway
lpop03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    I6N93_12030 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpop03019]
    I6N93_12030 (rnc)
   03009 Ribosome biogenesis [BR:lpop03009]
    I6N93_12030 (rnc)
   03036 Chromosome and associated proteins [BR:lpop03036]
    I6N93_12030 (rnc)
Enzymes [BR:lpop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     I6N93_12030 (rnc)
Messenger RNA biogenesis [BR:lpop03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     I6N93_12030 (rnc)
Ribosome biogenesis [BR:lpop03009]
 Eukaryotic type
  90S particles
   RNase
    I6N93_12030 (rnc)
 Prokaryotic type
  rRNA processing factors
   I6N93_12030 (rnc)
Chromosome and associated proteins [BR:lpop03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     I6N93_12030 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: QPQ23375
LinkDB
Position
complement(2761994..2762674)
AA seq 226 aa
MNPILINRLQKKLGYTFRQYDLLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIQMVEKLILEWYQSRLNEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCLVSGFSEPVVGTGSSRRKAEQAAAEQALIQLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccattctcataaatcgtttacaaaaaaaactgggctatactttccgacaatat
gatcttctactgcaggccctgacgcatcgtagcgccagcagtaaacacaatgaacggctg
gaattcctcggggactccattctgagctttgtgatcgccaatgcgctctatcaccgtttc
ccccgcgttgatgaaggggatatgagtcgaatgcgcgccacgctggtgcgcggcaacacg
ctggcggagattgcgcgcgagttcgagttgggtgaatgtctgcgtctggggccgggagag
ttgaagagcggcggtttccgtcgtgaatccattctggcagatacggttgaagcgctgatc
ggcggcattttcctagatagcgatatccagatggtcgagaagctgatcctcgagtggtat
cagagccgtctgaacgaaatcagccccggcgacaagcaaaaagatcccaaaacccgactg
caggagtttctgcagggacggcatttaccgctgcctacctatctggtggtgcaggtacgt
ggtgaagcgcacgatcaagagttcaccatacactgtctggtcagcgggtttagcgaaccg
gtggtcggcacggggtcgagccgtcgtaaagctgagcaggctgcggcagaacaagcgtta
atacagctggagcttgaatga

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