Lonsdalea populi: I6N93_12270
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Entry
I6N93_12270 CDS
T06954
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lpop
Lonsdalea populi
Pathway
lpop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6N93_12270 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpop03019
]
I6N93_12270 (pcnB)
Enzymes [BR:
lpop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
I6N93_12270 (pcnB)
Messenger RNA biogenesis [BR:
lpop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I6N93_12270 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QPQ25899
LinkDB
All DBs
Position
2806445..2807854
Genome browser
AA seq
469 aa
AA seq
DB search
MIFTRVANFCRKVLNRENESGASQAPHESMTVIPRDQHTISRSDISDNALKVLYRLNKSG
YEAYLVGGGVRDLLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEVIE
VATFRGHHEQHQEQLLKNTSQQGQNGMLLRDNIFGSVEEDAQRRDFSINSLYYSSADFTV
RDYTNGLSDLNQRIIRLLGEPEKRYREDPVRMLRAVRFAAKLDMTISPETAEPIPRLASL
LHDIPPARLFEESLKLLQAGYGHPTYKLLCEYQLFQPLFPLISCNFTDTGETVMERMIVQ
VLKNTDQRIQNGMRVNPAFLFAAMLWYPLIEHAQKLAQESGLAYFEAFALAMNDVLDEQC
RSLSIPKRITSLIRDIWQLQLRLSRRQGKRAFKLMEHPKFRAAYDLLCLRAEIEQQPELQ
RLAQWWGEFQVAAPPRQQVLLSSLDDGPTPHRRSRRPRQRPAAPRQGQQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
attatctttacccgagtagctaatttctgtcgcaaggtactgaaccgtgagaacgagtcc
ggcgcttcccaagcaccgcacgagtccatgacggtcattccgcgtgaccagcatactatt
tcacgcagtgacattagcgataatgccctgaaagtactttaccgcctgaacaagtcaggc
tatgaggcttatctggtcggcggcggcgtgcgtgatttgctgctgggcaaaaagcccaaa
gattttgatatcaccaccaacgccacgccggaacaggtacgcaagctcttccgcaactgt
cgtctggttggacgccggttccgtctggcgcacgtcatgttcggtcccgaagtgattgaa
gtcgcgaccttccgcggtcatcacgaacagcatcaggaacagctgctgaaaaacacgtcc
cagcaggggcagaacggcatgctgctgcgcgacaatattttcggctcggtggaagaagac
gcccaacgccgcgatttttccatcaacagcctctactacagcagcgctgacttcaccgtt
cgcgactacaccaatgggcttagcgacctgaatcagcgcatcattcgcctgctcggcgag
ccggaaaaacgctaccgcgaagatccggtgcggatgctgcgcgccgtgcgtttcgccgcc
aagctggacatgaccatcagcccggaaaccgccgagccaatcccgcggctggcctcgctg
ctccatgatattccgccggctcgcctgttcgaagagtcgctgaagctgctgcaagcgggc
tacggccacccaacctataaattgctgtgcgaataccagctgttccagccgctgttcccg
ttgatcagctgcaacttcaccgacacgggcgaaaccgtgatggagcggatgatcgtgcag
gtgctgaaaaacaccgatcaacgcatccaaaacggtatgcgcgttaatccggcattcctg
ttcgccgccatgctgtggtatccgctgatcgagcatgcccagaagctggcgcaggaaagc
ggtctggcctatttcgaagctttcgcgctggcgatgaacgacgtgctcgacgagcaatgc
cgttcgctctccattcccaaacgcattacctcgctgatccgcgatatctggcagctacag
ctgcgcctgtctcgccggcagggcaaacgcgccttcaagctgatggagcatcccaagttc
cgtgcggcttacgatttgctgtgcctgcgcgccgagatcgaacagcagccggagctacag
cgtctggcgcagtggtggggcgaattccaggtggccgcgccgccgcggcagcaggtatta
ctgagctcgctggatgacggcccgacgccgcaccgccgctcgcgccgtccgcgtcagcgc
ccggcagcgccgcgccaaggtcaacaataa
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