Lonsdalea populi: I6N93_13165
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Entry
I6N93_13165 CDS
T06954
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lpop03110
]
I6N93_13165 (clpB)
Chaperones and folding catalysts [BR:
lpop03110
]
Heat shock proteins
HSP100
I6N93_13165 (clpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
NBD_SMAX1
TniB
AAA_24
nSTAND3
bpMoxR
AAA_18
AAA_14
AAA_7
IstB_IS21
NACHT
DUF815
AAA_19
T2SSE
DNA_pol3_delta2
RF-1
Motif
Other DBs
NCBI-ProteinID:
QPQ23557
LinkDB
All DBs
Position
complement(2995219..2997792)
Genome browser
AA seq
857 aa
AA seq
DB search
MRLDRLTNKFQLALADAQSLALGRDNQFIEPLHLMSALLNQEGSTVSPLLAAAGVNVARL
KQEIEQALSRLPQVEGTGGDVQPSNELVRTLNLCDKLAQKRGDTFISSELFVLAALEARS
TLTDLLKNAGANMDSVTKAIDQIRGGENVNEQGAEDQRQALKKFTIDLTERAEQGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLAL
DMGSLVAGAKFRGEFEERLKGVLNDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELH
HHVQITDPAIVAAATLSHRYIADRKLPDKAIDLIDEAASSIRMQIDSKPEALDRLDRRII
QLKLEQQALKKEPDDASLKRLELLNTELEEKERDYSKLEEEWKAEKASLTGTQNIKAALE
QAKIELEQARRQGDLGQMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDTEIAEVL
ARATGIPVSRMLEGEREKLLRMEDELHRRVIGQNEAVEAVANSIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELCKTLAKFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGEMSYSQMRDMVMNVVNHHFRPEFINRIDEVVVFHPLGQEHIMSIAQIQLQ
RLYKRLEERGYSVTISEPALEMLGKIGFDPVYGARPLKRAIQQLIENPLAQQILSGKLLP
GKPITLDLDGESIVAHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggatcgtcttactaataagttccagcttgccctcgctgatgcccaatctctc
gctcttggtcgagacaatcaatttatcgaaccactgcatttaatgagtgcccttttaaat
caggaaggaagcacggtcagcccgctgttagccgcagctggcgttaatgtcgctcgtctg
aaacaagagattgagcaggcgttaagccgtctcccgcaggttgaagggacgggaggcgat
gtacagccctccaatgaattggtacggacattaaatctttgcgacaagctggctcagaaa
aggggtgacacctttatatcgtcggaactgtttgttctggcggcgttggaagcgcgcagc
acgttgacggatctgctaaagaatgccggcgccaacatggatagtgtgactaaagcgatt
gaccaaatccgtggaggagaaaacgtgaacgaacaaggggctgaagatcagcgccaggct
ttaaaaaaattcacgatcgatttaaccgaacgtgctgagcagggcaagttggatcccgtt
attggccgtgatgaagaaattcgtcgcaccattcaggtgctgcaacgcagaaccaaaaat
aacccggtactcattggtgagcctggggtcggtaaaacggccatcgtcgaagggttggcg
cagcgcatcgtcaatggggaagtgccggaaggattgaagaacaaacgagtgctggcgctg
gatatggggtcgctggtggctggcgccaaattccgcggggagttcgaagagcgtctgaaa
ggcgtcctgaacgatctctcgaagcaggaaggcagcgtcatcctgtttattgatgaactg
catacgatggtcggggcggggaaagccgatggcgctatggatgcgggcaatatgctcaaa
ccggccttggcgcgcggtgagttgcactgcgtcggggcgaccacgctggacgaataccgt
cagtacattgagaaagacgccgcgctggagcgccgcttccagaaagtgtttgtggccgaa
ccgacggtggaagatacgatcgcgatcctgcgtgggttaaaagaacgttacgaactgcat
catcatgttcagatcacggacccggcgattgtggctgcggcgacgttgtcccatcgctat
attgcagaccgcaaactccctgataaagcgattgacctgatcgatgaggctgcatccagc
attcgtatgcaaatcgactctaagcctgaagcgctggaccggttggaccgtcgaatcatc
caactgaagctcgaacagcaggcgctgaagaaagagcctgatgacgccagcctgaaacgg
ctcgagcttttgaataccgagttggaagagaaagagcgggattactcgaaactggaagag
gagtggaaggccgagaaagcctccttgactggtactcagaatattaaggcggcgctggaa
caggcaaaaattgaactggaacaggcgcgccgccagggcgacctgggccaaatgtccgag
ttgcagtacggcaagattcctgagctggaaaaacaactggcggcggccacgcagtcggaa
ggcaaaacgatgcgtctgctgcgtaataaggtaacggacactgaaattgccgaagtgctg
gcgcgcgctacgggtattcctgtgtcgagaatgctggaaggcgagcgcgaaaaactcctt
cgtatggaagacgagttgcatcgccgcgtgatcgggcagaacgaagcggtcgaagcggtc
gcgaactctatccgccgtagccgcgccgggctggccgaccccaatcgtcctatcggctca
ttccttttcctggggccgacgggggtgggtaagaccgaactgtgcaaaacgctggcgaaa
ttcctcttcgatagcgacgatgcgatggttcgtatcgatatgtccgaattcatggaaaag
cattcggtatcccgtttggtgggcgcgcctccggggtatgtcggttatgaagaagggggt
tacctcacggaagcagtaaggcgtcgtccttattccgtgattctgctggatgaagtggag
aaggcgcatcctgatgtcttcaacatcctgctgcaggtgctggatgatggtcgcttgact
gacgggcagggacgcacggtggattttcgcaacacggtggtcatcatgacatccaacttg
gggtcggacctgattcaggaacgatttggcgagatgagctatagccagatgcgcgatatg
gtcatgaatgtcgttaaccaccacttccgtcctgagttcatcaaccgtattgatgaagtc
gtggtcttccatcccttagggcaggaacacattatgtcaattgcccagattcagttgcag
cgcttgtataaacgactagaagagcggggctatagcgtgacgatttctgaacctgcattg
gagatgctgggtaaaattgggtttgacccggtgtatggggctcgcccattgaagcgtgcc
atacagcaactgattgaaaacccacttgcgcagcaaatattgtctggcaagctgcttccg
ggtaagccaattaccttggatcttgacggtgagtctatcgtcgcgcatcagtag
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