Lonsdalea populi: I6N93_13990
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Entry
I6N93_13990 CDS
T06954
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpop03016
]
I6N93_13990 (truB)
Enzymes [BR:
lpop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I6N93_13990 (truB)
Transfer RNA biogenesis [BR:
lpop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I6N93_13990 (truB)
Prokaryotic type
I6N93_13990 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QPQ23696
LinkDB
All DBs
Position
complement(3199618..3200574)
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AA seq
318 aa
AA seq
DB search
MGRPRRRGRDVHGVLLLDKQQGTSSNDVLQKVKRLFNANKAGHTGALDPLATGMLPICLG
EATKFSQHLLDSDKRYRVIARLGQRTDTSDADGNVVEERPVTFTPEALAQALDGFRGTTP
QVPSMFSALKYQGRPLYEYARLGQTVPREAREITVYELQQIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPVERMVTLGQLRALVERAAAEEQPVSALLDPL
LLPMDSAVQEFPEVNLPEVVAGYLKLGQAVRSINAPDSGMVRITEGDARKFIGMGTIDEE
GRVAPRRLVVEYPEPEAV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcctcgtcgtcgcggccgggacgttcatggcgttctgctgctggataaacag
cagggaacatcgtccaatgatgtgctgcaaaaggttaaacgtctcttcaatgccaacaag
gcagggcatactggcgcgctggatccgcttgcgacgggcatgctgccgatttgtttaggt
gaggcgactaagttttcccagcatctgctggactccgacaagcgttatcgcgtaattgct
cgattgggccagcggacggatacgtcggatgctgacggtaacgtcgtcgaagagcgccca
gtcacgttcacccctgaggcgttagcacaggcgttagatggattccgcggtacaaccccg
caggttccgtcgatgttctctgccctgaaatatcagggacgcccgctgtacgaatatgcc
cgtttggggcagaccgttcctcgcgaagcgcgtgaaatcacggtgtatgagctgcagcag
attcgctgggaaggggatgaactggagctggagattcactgttcgaaaggcacctatatc
cgtactatcattgacgatctgggtgagaaacttggctgtggcgctcacgtgatttatttg
cgccgtctccaggtggcgacgtatccggtagaacggatggtgaccttagggcagctgcga
gcattggtcgaacgtgccgctgccgaagaacagcctgtcagcgcgctgcttgatcccttg
cttttgcctatggacagcgctgttcaggaatttcctgaggttaatttgccggaagtcgtg
gccggttacctgaaattgggacaggcggtacgttccatcaacgccccagattcgggaatg
gttcgcatcacagaaggcgacgcgcggaagtttatcggtatgggcaccatcgatgaagaa
ggtcgggtcgcacctcgtcgtctggtggtcgaatatcccgagccagaggccgtttga
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