Lonsdalea populi: I6N93_14060
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Entry
I6N93_14060 CDS
T06954
Symbol
dacB
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
lpop
Lonsdalea populi
Pathway
lpop00550
Peptidoglycan biosynthesis
lpop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I6N93_14060 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpop01002
]
I6N93_14060 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpop01011
]
I6N93_14060 (dacB)
Enzymes [BR:
lpop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I6N93_14060 (dacB)
Peptidases and inhibitors [BR:
lpop01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
I6N93_14060 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
lpop01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
I6N93_14060 (dacB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QPQ23708
LinkDB
All DBs
Position
3213107..3214540
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AA seq
477 aa
AA seq
DB search
MRFLSIATGLLCTCILHTASATAPVEDYIQYLPDGANLALVMQRVGAPSPTLDYRSQQMA
LPASTQKVITALAALLQLGPDFRFTTTIESTGSVSNGVLRGNLIVRFSGDPTLKRQQIRS
MVQVLKKNGIREIAGNVLIDTSVFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL
YSAPNPGDNAFIRVASYYPVQMFSEVRTLAKGSPDAQYCELDVVPGELNRFTLTGCLTQR
SDPLPLAFAIQDGGSYAGAIVKDELLEADIRIGGSLRRQTRPGLTGTVLAQTQSDSLHEL
LTIMLKKSDNMIADTVFRTIGHNRFNVPGTWRAGSDAVRQILRQKAGVDLGNSVVVDGSG
LSRHNLLAPATMMQVLQYIAQHDNELNYIKMLPLAGYDGTLRYRGGLHEAGVDGKVSAKT
GALQGVYNLAGFITTASGQRMAFVQYLSGYSADDPKTRRVPLVRFESRLYKDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcttatctattgctaccggccttctctgcacctgtattctgcatactgcctcg
gctaccgccccggtagaggactatatacaatacctgcctgacggcgctaatctggcgttg
gtgatgcagagagtaggggcgccatctcccacgcttgattatcgcagccaacaaatggcg
ctcccggccagcacacaaaaagtcattactgcattggcggcactactccaactcggtcct
gactttcgatttaccaccacgatagaaagcacaggctcggtcagtaacggcgttttgcgt
ggaaatctgattgtgcgcttcagcggcgatccgacgttaaaacgccagcagattcgttcc
atggtacaggtattgaaaaaaaatggtatccgcgaaattgctggcaatgtgctgatcgat
acctccgtattcgcgagccacgataaagcacccgggtggccatggaacgatatgacgcaa
tgctttagtgcccctccggccgctgccatcgtcgatcggaactgcttctcggtgtccctc
tacagcgccccaaatcccggtgacaatgctttcatccgcgtcgcctcttattaccccgtt
cagatgttcagcgaagtcagaacgctagcgaaaggctcgcccgacgcgcaatactgcgaa
cttgatgttgtcccgggggagctgaatcgctttacgcttaccggatgtttgacgcagcgt
tcagatcccctccccctggcatttgccattcaggatggcggcagctatgccggcgctatc
gtcaaggatgagttactggaagcggatatccgtatcggtggcagcctgcgcagacaaact
cggccgggattaacggggacggttctggcgcaaacgcagtctgattctttgcatgaattg
ctgaccatcatgctgaaaaagtcggacaacatgatcgcggatacggtatttcgtaccatt
gggcataaccgatttaatgtccctggcacctggcgtgctggctcagatgcggtgcgccag
attttgcgtcaaaaagccggcgtcgaccttggcaacagtgtcgtcgtggatggttcgggt
ttgtctcgtcacaacctgcttgcgcccgcaaccatgatgcaggtgctgcaatacatcgct
cagcacgataacgagttgaactatattaagatgctgccactggcgggatatgacggtacg
cttcgctatcgaggcggattgcatgaagcgggcgttgacggcaaggtttcagcaaaaacg
ggagcattgcagggcgtatacaatctggccggtttcatcacgaccgccagcggtcagaga
atggcctttgtacagtatctttccggctactccgccgatgacccaaaaacgcgtcgagtt
cctctggtgcgttttgagagcagactctacaaagatatttatcagaacaattaa
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