Lonsdalea populi: I6N93_14615
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Entry
I6N93_14615 CDS
T06954
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
lpop
Lonsdalea populi
Pathway
lpop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6N93_14615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_14615
Transporters [BR:
lpop02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I6N93_14615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_29
nSTAND3
AAA_22
ABC_ATPase
nSTAND1
RsgA_GTPase
NACHT
AAA_7
SPIN90_LRD
AAA
Mg_chelatase
AAA_16
AAA_23
ATP-synt_ab
Sigma54_activat
Zeta_toxin
AAA_33
DUF3987
NB-ARC
PRK
DUF87
Motif
Other DBs
NCBI-ProteinID:
QPQ23802
LinkDB
All DBs
Position
complement(3305466..3307109)
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AA seq
547 aa
AA seq
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MSEHRKDILRVENLCVNTAQGAPILQGISFEIQAGETVCLVGESGSGKSVTSLATLGLLP
KGALSATGGRILLDGEDVLQVSNGRLKALRGSRMAMIFQEPMTALNPVLTVGRQIDEVLQ
THTDLHAQARKARVLNALSQVHLPDIERVYEAYPHQLSGGQRQRIMIAMALVLEPRLLIA
DEPTTALDVTTQQQILKLIRELQQKHGTAVLFITHDMGVVVDIADRVCVMRQGHIVESGT
VQQVLSAPQEAYTQALLSAVPRLAPRAARREAASAQVVLDVVELGKTYPAAGSAWSPFRK
RRQGTRAVHDVSFMLKRGRTLGIVGESGSGKSTLARCVMRLLTPTCGAVRVTGNDISELT
PVGLKPHRKRIQMVFQDPNRSLNPRMSIGRSLVEGPMNFGMPFAQAWARGQALLELVGLP
ADAIDRFPHQFSGGQRQRIAIARALAMEPDVIVADEAVSALDVSVQAQVLQLLADIQTRM
QVAILFITHDLRVAAQVCDDVLVMQHGQVVEYGPAADVLAHPQQPYTQQLMEAVPGKGWD
FAAGRRM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaccggaaggatattctgcgcgtggaaaacctctgcgtgaatacggcgcag
ggcgcgccgatcctgcaaggcatctcattcgagatccaggcgggagagaccgtctgcctg
gtcggggagagcggctcgggcaagtcggtgacgtcgctggcgacgctcgggctgttgccc
aaaggtgcgctgagcgcgaccggcgggcggatcctgctggacggcgaagatgtgttgcag
gtcagcaatggtcgcctcaaggcgctgcgcggcagccgcatggcgatgatttttcaggag
ccgatgaccgcgctcaacccggtactgacggtcggtcggcagattgacgaagtgttgcag
acccacacggacctgcacgcccaggcgcgcaaggcgcgggtgctgaacgcgctgtctcag
gtgcatctgccggacattgagcgggtgtacgaagcctatccgcatcagctgagcggcggc
cagcgccagcgcatcatgattgccatggcgctggtgctggagccgcgcctgcttatcgcc
gacgagccgaccaccgcgttggacgtcacgacccaacagcagatccttaagctgatccgc
gagttgcagcagaagcatggcacggcggtgctgtttatcacgcatgacatgggcgtggtc
gtggatatcgccgaccgcgtgtgcgtgatgcggcaaggacatatcgtggagtcgggcacc
gtacagcaggtgctttcggcgccgcaagaagcgtatacccaggccctgttgtcggcggtg
ccgcgcctggcgccccgggcggcgcggcgcgaggccgccagcgcgcaggtggtgctcgac
gtcgtcgagctgggtaaaacctacccggcggcgggcagcgcgtggtcaccgtttcggaaa
cggcggcaaggcacgcgggccgtccacgacgtgtcgtttatgctcaagcgcggccgcacg
ctgggcatcgtcggggagagcggttccggcaagtcgacgctggcgcgctgcgtgatgcgt
ttgctgacgccgacctgcggcgcggtacgagtgaccggcaacgatatttccgagctgacg
ccggtgggactcaagccgcatcgtaagcgaattcagatggtgtttcaggaccctaaccgg
tcgctgaatccacgcatgagcattggccggagtctggtggaaggaccgatgaatttcggc
atgcccttcgcgcaggcctgggcgcggggtcaggcgctgctggaactggtcgggctaccg
gcggacgctatcgaccgctttccgcatcagttttccggcggtcagcggcagcgtatcgcc
attgcccgcgcgctggcgatggagccggacgtcatcgtcgccgatgaggccgtgtctgcg
cttgacgtttcggtgcaggcgcaggtgctgcaactgctggcggatatccagacgcgtatg
caggtcgccattttgttcatcacccacgatttacgtgtggccgctcaggtctgcgacgat
gtgctggtgatgcagcacggtcaggtagtcgaatatgggccggcggccgatgtgctggcc
catccccagcagccctatacccagcaactgatggaggcggttcccggtaagggatgggac
ttcgccgccggacggaggatgtga
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