KEGG   Lonsdalea populi: I6N93_14925
Entry
I6N93_14925       CDS       T06954                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
lpop  Lonsdalea populi
Pathway
lpop03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I6N93_14925 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lpop02044]
    I6N93_14925 (tssM)
Secretion system [BR:lpop02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I6N93_14925 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical YqhR YniB
Other DBs
NCBI-ProteinID: QPQ23858
LinkDB
Position
complement(3377590..3381093)
AA seq 1167 aa
MFKTIITFLRQQLPKLRLSWVMLGIVLWIVVLALAWWLGPRLHVFDTRPLDTIWSRIVFT
LLWLWLGFSISAWRLWRRVRHIRAEQQKQKIAEHDPQQIFVDKQQAFLDRWLSALREHLG
AGILYKMPWYLTIGLPGSGKSSLIHRANEANKLNPHLDAELRDFAAGQEVDCWVGESAVI
FDPDGQMMAPSNLDVAPEERKHERLWTHLLTWLSENRRRQPLNGLVLTLDLAWLSHASVP
ERQAYAQLIRGRIQEIVTTLNTRLPIYVALTKLDMLRGFDIAYRHLDKETRQSILGVTFD
LKGSAGKGWQEELDAFWDKWVSALNDNLPGKMLSNLTSEQRSALFSFTRQLAGLKDYVEE
ILADAITPEEYKPLLVRGVYACSVYQQGVPFDAFAQAATFRYQLPEPVNSALKGESNTFF
VKRLFSGVIFPEAHLAGENRLHSLYRRRRIGIGMGCMGVLAALLIIGWHHYYRLNEQAGR
NVLDKAQAFTGTTELAGQKNQGFGYSQLPRLNLIREATLSFGDYREKTPVLSEMGLYQGD
KIGPFVEGTYLQLLSQRFLPAVMQGLQDDLNQAPKGSEQKLAILRIMRMLDDASGRNKSL
VEQYMGQRWQRAFPAQGKVQESLMQHLDYALEHTDWHQARQQRDAQAIAAFEPFRAPIAD
AQRELSKLPMFQRIYQSLVTKAVDVLPPDMMIRDEVGPAFDTVFALRNERAGTVPRLLTQ
AGFSEYFIKQDKTLFDLAALDAWVLGQREKVYLSDEDRKEIQRQVNDRYITDYVNQWQKV
LAGLDVQPLQTPEQALDVLTAITGNDQPFQRVIAALNDNTRARKLSENDNDPAQIMNARI
SRTFMTTNSTLSGRGDQVALIQEVNQKLTEFYHNLEQVVNAADPGQAALKSVQLRQTNRF
ADPAFALQQYARSLPTPLDRWVGQIAEQSSNLVTDLAMSSLNQEWQDKVVTPFNDQLADR
YPFNPASDKDVALSEMERFFAPGGTLDSFYQANLKSILNEGQGSGDVGTALQTELVKQLD
RADRIRKTLFNAQGGLEVHFVLEPIELTANKRRSVLNLDGQLLEYSHGRRQKTPLVWPNN
MRDGAESKITLVPDNRERSPRSVGYIGPWAMFRLMSAGELKQVNDNTFDVQFAVDQGSMA
YRVYTDASHNPFAGGLFSQFRLPESLY
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgtttaaaacaatcattacctttttgcggcaacagctgccgaagctaaggctctcctgg
gtcatgctggggatcgtgctctggattgtcgtgctggcgctggcctggtggcttggcccg
cgactgcacgtattcgacacgcggccgctggatacgatctggtcacgcatcgtcttcacg
ctattgtggctctggctgggctttagcatcagcgcctggcggctatggcgtcgtgtgcgc
catatccgggcagagcagcaaaagcagaagatcgccgaacacgatcctcaacagatcttc
gtcgacaagcagcaggcgtttctggatcgctggctgtcggcgctgcgcgaacatctgggg
gcgggcattctctacaagatgccgtggtatctgactatcggtttgcctggcagcggtaaa
agcagcctgatccaccgcgccaacgaggcgaacaagctcaatccgcatctggatgccgaa
ctgcgagatttcgcggcgggtcaggaagtggactgctgggtgggcgaaagcgccgttatc
ttcgatcccgacggtcagatgatggcgccgtcgaatctcgacgtcgcccctgaagaacgc
aaacatgaacgtctgtggacgcatctgctgacatggttgagcgagaatcgcaggcgtcag
ccgttgaacgggctggtgctgacgctggatctggcctggttgtctcatgccagcgtgccg
gaacgtcaagcctacgcgcagctgatccgagggaggatccaagagatcgtcaccacgctg
aacacccgcctgccgatctatgtcgcgctcaccaagctggatatgctgcgcggcttcgac
atcgcctaccgccatctggataaggaaacgcgtcagtcgattctaggggtgaccttcgac
ctgaaaggcagcgccggtaaaggctggcaggaagagctggatgcgttctgggacaagtgg
gtgtccgcgctcaacgacaatctgcctggcaaaatgctctccaatctcaccagcgaacaa
cgcagcgcgttgttcagctttacgcggcaactggccggattaaaggattacgttgaagag
atcctcgccgacgccatcacgccggaagagtacaagccgctgctggtgcgcggcgtttac
gcctgctctgtctatcagcagggcgtgccgttcgacgccttcgcgcaggcggcgaccttc
cgctatcagctgccggaaccggtcaactcggccctcaagggcgagtccaacactttcttc
gtgaagcgcctgttctccggcgtgatcttccccgaagcgcatctggccggggaaaaccgg
ctgcacagcctctatcgccgccgccggatcggcatcggcatgggctgcatgggcgtgctc
gcggccctgctgattatcggctggcaccactactatcggctgaacgaacaggccggccgc
aacgtactggacaaggcgcaggcgtttacgggcaccaccgaactggcagggcagaagaat
cagggcttcggctatagccaactgccgcgtctcaacctgatccgcgaggctacgctgtca
tttggcgactaccgcgagaaaacgccggtgctgtcggagatggggctgtatcagggcgat
aagatcggccccttcgtcgagggcacctatctgcaattgctgagccagcgtttcctgccg
gcggtgatgcaggggttgcaggacgatctcaatcaggctcccaaaggcagcgaacagaag
ctggctatcctgcgcatcatgcggatgctcgacgatgcgtccggccgcaacaagtcgctg
gtcgagcagtacatgggacagcgttggcagcgggcgttccccgctcagggcaaggtgcag
gaatctctgatgcagcatctcgactatgcgctggaacatacggactggcatcaggcccgt
cagcaaagggatgcgcaggcgatcgccgccttcgaaccgttccgcgcgccgatcgccgac
gcgcagcgagagctgagtaaactgccgatgttccaacgcatttaccagagtctggtcacc
aaggccgtggacgtgttgccgccggacatgatgatccgcgatgaagtcgggccggcgttc
gacaccgtctttgccctgcgcaacgagagggcgggtacggtaccgcggctgttgactcag
gcgggcttcagcgaatatttcatcaagcaggataagacgctgttcgatctggccgcgctg
gatgcctgggtgctgggccagcgtgagaaagtctatctgagcgatgaagacaggaaagag
atccagcgtcaggtcaacgatcgctacattaccgactacgtcaaccagtggcagaaggtg
ctggccggtctggacgtgcagccgctgcaaacgccggagcaggcgctggacgtactgacg
gcgatcaccggcaacgatcagcctttccaacgggtgatcgccgcgctgaacgacaacacc
cgcgcccgcaagctgtcggagaacgacaacgacccggcgcagatcatgaacgcgcgcatc
agccgcacatttatgaccaccaactcgacgctcagcgggcgcggcgatcaggtcgcgctg
atccaggaagtgaaccagaagctgacggagttctatcacaacctggagcaggtcgtgaat
gcggccgatccgggacaggcggcgctcaagtcggtgcagctgcgtcagaccaaccgcttc
gccgatccggcgtttgccttgcagcagtatgcgcgcagcctgccgacgccgctggaccgc
tgggtcggtcagatcgccgagcagagttcaaatctggtgacggatctggccatgtcttca
ctcaatcaggagtggcaggacaaggtggtgacgccgttcaacgatcagctggcggatcgc
tatccgttcaatcctgcgtcggacaaggacgtggcgctgtcggaaatggagcgcttcttc
gcgcccggcggtacgctggacagcttctatcaggccaacctgaagtccatcctgaacgaa
ggccagggaagcggcgacgtgggcacggctttgcagaccgagttggtcaagcagcttgat
cgcgccgatcgcatccgtaaaaccctgttcaacgcgcagggcgggctggaggtccatttc
gtgctggagcctatcgaactgaccgcgaacaaacgccgcagcgtactgaatctggacggg
cagctgctggagtattcccacggccgccgtcagaaaacgccgctggtgtggccgaacaac
atgcgcgacggcgcggaaagcaaaatcacgctggtgccggacaaccgcgagcgttcgccg
cgcagcgtgggctacatcggaccgtgggcgatgttccgcctgatgagcgcgggcgagctg
aaacaggtcaacgacaacaccttcgacgtgcagttcgccgtcgatcaaggctcgatggcc
tatcgcgtatacaccgacgcaagccataacccgttcgccggtggtctgttcagccagttc
cggctgcctgaatccctgtattaa

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