KEGG   Lonsdalea populi: I6N93_14945
Entry
I6N93_14945       CDS       T06954                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
lpop  Lonsdalea populi
Pathway
lpop03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I6N93_14945 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lpop02044]
    I6N93_14945 (tssH)
Secretion system [BR:lpop02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I6N93_14945 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_7 AAA_22 NACHT TniB AAA_14 AAA_29 RsgA_GTPase nSTAND3 AAA_25 DUF815 Sigma54_activat Clp_N AAA_24 NBD_SMAX1 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: QPQ23861
LinkDB
Position
complement(3384673..3387306)
AA seq 877 aa
MIRIELPVLVERLNPICRHMLEEAAALCVNCQGAEIRVDHLLLKMLDTPLCDVRQILKRA
DVDVDELTQLLQPSGVDKEYEQGYPSFSPLLIEWLQDSWLLASAEMQHATLRSGVLLLVL
LMTPNRYLAGAVTRSLAKVNRELLRQQFDEWVKDSAETDVSSAAAGNAGGAAAVPQGDAS
LLARFTDNITEQARTGKLDPVLCRDKEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGL
ALRIVADQVPEKMRNVELLSLDLGAMQAGAAVKGEFEKRFKGVMQEVKTSPQPIILFIDE
AHTLIGAGNQAGGLDVSNLIKPALARGELRTIAATTWSEYKKYVEKDAALSRRFQMVKVG
EPDAEEATVILRGLRSIYEKAHGVLIDEAALHAAAQLSSRYISGRQLPDKAIDVLDTACA
RVAINLTTPPRAISHLQNQLHQREQEILQLERQTRIGLGDNAERLALLREAQQADEAELT
AVNTDWQAQQALVGEVIALRAALLADELTDEVTLDEETLSLTGATQRLSEREQALAALQE
DAVLVSAHVDKAQVAAVIAEWTGVPLNRISQGELDVVTQLPTHLGANIKGQDLAIAQLHK
HLLTARADLRRPGRPLGAFLLVGPSGVGKTETVLQIADLMFGGRNYLTTINMSEYQEKHT
VSRLIGSPPGYVGFGEGGILTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADG
EGRLIDCKNVVFFLTSNLGFQTIVDYADQQDALLDALYPELAGFFKPALLARMEVIPYLP
LAQDTLVDIVHGKLSRLVNLLKARFDAEVVIDDDVPVEILRLANRSENGARMLESVIDGH
LLPPVSLQLLQRISAGEAIARIRFSVNDGRFVSEVEG
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgattcgaatagaactgccggtgttggttgaacggctcaatccgatttgtcgacacatg
ctggaagaggccgcggccctgtgtgtgaactgtcagggcgcggaaatccgggtggatcac
ctgctgctgaaaatgctggatacgccgctttgcgacgtccgtcagatcctcaagcgcgcc
gacgtggatgtggatgaactgacgcaactgctgcagccgtccggcgtggataaagagtac
gaacagggctatccctcgttttcgccgctgctgattgagtggctgcaggacagctggctg
ctggcatccgccgagatgcagcacgccacgctgcgcagcggtgtgctgctgctggtcctg
ctgatgacccccaatcgctaccttgccggggccgttacgcgctctctggcgaaagtgaac
cgtgagctgctgcgtcagcagttcgacgagtgggtgaaagactccgcggaaacggacgtc
tcgtctgcggccgccggcaacgcgggcggcgcagcggctgtgcctcagggcgatgcgtcg
ctgctggcgcgctttaccgacaacattaccgagcaggcccgcacgggcaagctggacccg
gtgctgtgccgcgataaagagatcgatctgatgatcgatatcctgtcgcgccgccgcaag
aacaacccgatcgtggtgggggaagcgggcgtcggtaaaagcgccttgattgaaggtctg
gcgctgcgcatcgtggcggatcaggtgccggagaaaatgcgcaacgtcgagctgctgtcg
ctggacttgggcgcgatgcaggccggcgccgccgtgaaaggcgagttcgaaaaacgattc
aaaggggtgatgcaggaggtgaaaacttcgcctcagcccatcattctgttcattgatgaa
gcccacacgttgatcggcgcgggcaatcaggccggcggactggacgtgtccaacctgatc
aaaccggcgctggcgcgcggcgagctgcggaccatcgccgccacgacctggagcgaatac
aagaaatacgtcgagaaagacgccgcgctgtcgcgccgtttccaaatggtcaaagtgggt
gaaccggacgcggaagaggccaccgtcatcctgcgcggcctgcgcagcatttacgagaag
gcacacggcgttctgatcgacgaagcggcgttgcatgccgcggcccagctgtcgtcgcgc
tatatctcgggccgtcagctgccggataaagccatcgacgtgctcgataccgcctgcgcc
cgcgtcgccatcaatctgactacgccgccgcgcgccatcagccatttgcaaaatcagctg
caccagcgcgagcaggaaattcttcagcttgagcgtcaaacccgaatcggtctgggcgac
aacgcggaacgactggcattgctgcgcgaggctcagcaggccgatgaagcggagcttacc
gccgtgaacacggactggcaggcgcagcaggcattggtcggcgaggtgattgcgctgcgc
gcggcgctgttggccgatgaactgaccgacgaggtcacgctggacgaggaaaccctgtcg
ctgacgggcgccacgcagcgtctgtccgagcgcgaacaggcgctggccgccttgcaggag
gacgccgttctggtctccgcgcacgtggataaagcgcaggtcgccgcggtgatcgccgag
tggaccggcgtgccgctgaaccgtatttcacagggcgaactggatgtcgtcactcagttg
ccgacgcacctcggggcgaacatcaaagggcaggatctggcgattgcccaactgcacaaa
catctgctgaccgcccgcgccgatctgcgtcgtccgggccgtccgctgggggcgttcctg
ctggtcggcccgagcggcgtcggcaagaccgaaaccgtgctgcagatcgccgacctgatg
ttcggcggccgtaactacctgacgaccattaacatgtcggaatatcaggagaaacacacc
gtatcccgcctgatcggctcgccgccgggctacgtcggcttcggcgagggcggcattctg
acggaggccatccgccagaaaccgtactcggtcgtgctgctggacgaagtcgagaaggcg
catcccgacgtgctgaacctgttctatcaggcctttgacaaaggggagctggcggacggc
gaaggccgcctgatcgactgtaagaacgtcgtcttcttcctgacctccaacctgggtttc
cagactatcgtggattacgccgaccagcaggacgcgctgctggatgcgctctatcccgaa
ctggcgggctttttcaaaccggcgctgctggcgcgtatggaagtgattccttacctgccg
ctggctcaggacacgctggtcgatatcgtccacggcaagctgtcgcgtctggtcaatctg
ctgaaagcgcgcttcgacgccgaagtggtgatcgacgacgatgtgccggtcgagattttg
cggttagccaaccgcagcgaaaacggcgcgcgcatgctggagtccgtgatcgacggtcat
ctgctgccgccggtgtcgttgcaactgctgcaacggatctccgcgggcgaagcgatcgcg
cgtattcgcttcagcgtgaacgacggccggttcgtttcagaggtggagggctga

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