KEGG   Lonsdalea populi: I6N93_14975
Entry
I6N93_14975       CDS       T06954                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
lpop  Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lpop02044]
    I6N93_14975 (tssF)
Secretion system [BR:lpop02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I6N93_14975 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QPQ23867
LinkDB
Position
complement(3392174..3393940)
AA seq 588 aa
MLLEHYFRDEIAYLRLQGRQFADAHPELTRFLSEQTTDPDVERLLEGFAFLTGSLRAKIE
DEFPELTHGLLGMLWPNYLRPVPSMTIMQFSVIPGAIARPALISRGCMLDSQPVDDVVCH
FQTCHDAWVYPADIRDISVQSGNDLSKISLDFNLHGPMLLNELQLDKLRFYLGGDSYTAY
ELYFWLSSKLSHIELEIDGKLFRQEASTLKTIGFEREDALLPYPSNVYSGYRILQEFFCF
PESFLFFQLSGADWPNQPLSVTDFKIHFCFACPLPAELKIRPDSFMLNCVPAINLFQHDS
EPINLNGRQTEYPLKASYRHADAYEIFSVDKVEGWIEGHMGRTRGEPRQYQPFESFQHQI
ERAKGRLALYYRTRVREAVSGDGFEHALSFVRGDETEAVDMDESISVSLTCTNRSKASQL
PVGAVCMPTGSSPSFATFRNIIRPTRPLRPALDGSLHWTLISNLSLNYVSLLRRDALVQI
LRTYDFPALHDKQAEQASRKRLAGIESIETTPIDRLIRGMPVRGLKSVLSVYQSAFASEG
ELYLFGTVLAHFFSLYASVNAFHLLEIINLDNKERYKWPVQIGQHSMM
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgcttctggaacactacttcagggatgaaatagcttacctgcgtctgcaaggacgccag
tttgccgatgcccaccctgaattgacccgttttctatcagaacaaaccaccgatccggac
gtcgagaggctgctggagggttttgcgtttctgacgggaagtttgcgggcaaaaattgag
gatgaatttcctgaattgacccacgggctgctgggcatgctttggccgaactatctgcgt
ccggttcccagcatgactatcatgcagttctcagtgatccctggagccattgcgcgaccg
gccttaatcagccgcggctgtatgctggatagccagccagtcgacgacgtcgtatgccat
ttccagacctgtcatgacgcctgggtgtatcctgcggatatccgcgacatcagcgtacaa
agcggtaacgacctctccaaaatcagcctggacttcaatctgcatgggccgatgctgctc
aacgaactgcagttggacaagctgcgtttttatctgggaggcgacagctataccgcctac
gagctctatttctggctctccagcaagctctcccacatcgagcttgaaatcgatgggaaa
ctcttcagacaagaagccagtacgttaaaaactatcggcttcgagcgggaagacgcactg
ctgccttatccgagcaacgtctactccggttaccgtattctgcaggaatttttctgcttc
ccagaaagcttcctgttcttccagctttccggcgccgactggccgaaccagccgctgtcg
gtaacagatttcaaaatccacttctgttttgcctgcccgctgccggcggaacttaaaatc
cgtcccgattccttcatgctgaactgcgtgcccgccatcaatctgttccagcatgacagc
gagccgatcaacctcaacggccgccagacggagtacccgctgaaagccagctaccgccat
gcggacgcctacgagattttttcggtggacaaagtcgaagggtggatcgaagggcacatg
ggccgcacgcgcggcgagccgcgtcagtatcagccgtttgaaagcttccagcatcagatc
gagcgtgcgaagggccgtctggcgctgtactaccgcacccgcgtgcgcgaagcggtcagc
ggcgacggtttcgaacatgcgttgtcatttgtgcgcggagatgaaaccgaagcggtcgat
atggatgaatccatatcggtctcgctgacctgtaccaatcgctccaaagcgtctcaactg
cctgtcggcgcggtctgcatgccgaccggcagctcgccgtcgttcgcgacgttcagaaat
attatccggccgacccggccgctgcgtcccgcgttggacggcagcctgcactggacgctg
atctccaacctgtcactgaactacgtctcgctgctgcgtcgcgatgcgctggtgcagatc
ctgcggacatatgacttcccggcattgcacgacaaacaggcggagcaggcgtctcgtaag
cgtctggccgggatcgaatcgattgaaaccacgccgatagatcggctgatccgcggcatg
ccggtgcgtgggctgaagtcggtgctgtccgtgtatcagtccgcctttgccagcgagggc
gagctgtatctgttcggcaccgtactggcgcatttcttctcgctttacgccagtgtcaac
gccttccatctattggaaatcatcaaccttgacaacaaggagcgctacaaatggccagtc
cagataggtcagcactccatgatgtga

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