Lonsdalea populi: I6N93_16105
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Entry
I6N93_16105 CDS
T06954
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpop03016
]
I6N93_16105 (trmA)
Enzymes [BR:
lpop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
I6N93_16105 (trmA)
Transfer RNA biogenesis [BR:
lpop03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
I6N93_16105 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Cons_hypoth95
MTS
Methyltransf_15
Methyltransf_31
Methyltransf_11
Methyltransf_12
PrmA
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QPQ24062
LinkDB
All DBs
Position
3632364..3633467
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AA seq
367 aa
AA seq
DB search
MTPEILPIENYDAQLEEKRIRLTTMMAPFSAPDPAVFRSPVSHYRMRAEFRVWHDGDDLY
HIMFDQLTKQRIRVDKFPAASELINALMPRLLSAIRPQPVLRRKLFQIDYLSTVSGEIVV
SLLYHRPLDEEWQQQACELRDQLRAQGFNLQLIGRATKTKICLDRDYVDEVLPVAGKDII
YRQVENSFTQPNAAMNVQMLEWALNVTAGSKGDLLELYCGNGNFSLALARNFDNVLATEI
AKPSVAAAQYNIAANQIDNVQIIRMAAEEFTQAMRGVRQFNRLKGIDLSSYHCETIFVDP
PRSGLDDDTLRLVLEYPRIMYISCNPETLCANLETLSQTHKVSQLALFDQFPYTHHMECG
VLLEKLA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagaaatcctgcccatcgaaaactacgacgctcagcttgaagagaagcgaatt
cgtcttacgacgatgatggcgccattttccgcgccggatcccgccgtgtttcgttctccg
gtcagccactaccggatgcgggccgagtttcgcgtctggcacgacggtgacgatctttac
cacatcatgttcgatcaactgaccaaacagcgtattcgcgtcgataaattccccgcggct
agcgagctgatcaacgcattaatgccgcggctgctgtccgccatccgtccacaacctgtg
ttacgccgcaagctattccagattgattatctttccacggtgagcggcgagattgtcgtc
tcgctgctgtaccaccgtccgttggatgaggagtggcagcaacaggcttgcgaactacgc
gatcaactgcgtgcccagggattcaatctgcaactgataggacgagcgacgaaaactaaa
atctgtctcgatcgggattatgtcgatgaagtgctgccggttgccggcaaagacatcatc
tatcgtcaggtggaaaacagtttcacccagcccaacgccgcgatgaatgtacagatgctg
gaatgggcgctgaacgtgacggccggttcgaaaggggacctgctggagctttactgcggc
aatggcaacttctcgttggcgctggcgcgtaacttcgacaacgtattggcgaccgagata
gccaagccatcggtggctgccgcgcaatacaacattgccgccaaccagatcgataatgtg
cagattattcgcatggcggcagaggagttcacccaagccatgcgcggagtccgtcagttc
aatcggcttaaaggcatcgatcttagcagctatcactgcgaaaccatttttgtcgacccg
ccgcgcagcggtttggatgacgatacgttacgtctggttctggaatacccacgcattatg
tacatatcctgcaacccggaaaccttgtgcgccaatctggaaaccctgagccagacacac
aaagtcagtcaactcgctctgttcgatcagttcccctacacccatcacatggagtgcggc
gttttactggaaaaattagcctaa
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