Lonsdalea populi: I6N93_16380
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Entry
I6N93_16380 CDS
T06954
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpop03021
]
I6N93_16380 (rpoH)
Transcription machinery [BR:
lpop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6N93_16380 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
QPQ24111
LinkDB
All DBs
Position
complement(3686890..3687747)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHFEGDLDAAKQLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPDIGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEVVARELGVTSKDVLEMESRMAAQDM
TFDPAPEDDAQPGHGMAPILYLQDKTSDFADGIEEDNWESHAADKLAHAMEGLDERSQHI
IRARWLDDDNKSTLQELADRYGVSAERVRQLEKNAMKKLRTAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacgg
ctgcattttgagggagacctggatgcggccaagcagctgatcctgtcacacctgcgcttt
gttgttcacgtagcccgtaactattccggctatggcctgccgcaggcggatttgatacag
gaaggcaatatcggcctcatgaaggccgtgcgccggtttaaccccgacatcggcgtccga
ctggtctctttcgccgtgcactggatcaaggcggaaatccacgaatatgtgctgcgcaac
tggcgcatcgtcaaagttgccacgaccaaagctcagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtttgggctggtttaatcaggacgaagtcgaggtggtcgcgcgtgaa
ctcggcgtgaccagtaaagacgtgctcgagatggaatcccgcatggcggcgcaggacatg
actttcgacccggcgccggaagacgatgcgcagccgggacacggtatggcccccattctg
tacctgcaggacaaaacgtctgactttgccgatggcattgaggaagacaactgggaaagc
cacgcggccgacaagctggcccacgcgatggaaggtctggacgagcgcagtcaacacatc
attcgcgcccgttggctggacgacgacaataagtccaccttgcaggaactggccgatcgc
tacggcgtttccgccgagcgcgtgcgccagttggaaaagaacgcgatgaaaaagctgcgc
acggcgatagaagcttag
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