Limosilactobacillus portuensis: PRK60_03100
Help
Entry
PRK60_03100 CDS
T08838
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpor
Limosilactobacillus portuensis
Pathway
lpor03030
DNA replication
lpor03410
Base excision repair
lpor03420
Nucleotide excision repair
lpor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRK60_03100 (polA)
03410 Base excision repair
PRK60_03100 (polA)
03420 Nucleotide excision repair
PRK60_03100 (polA)
03440 Homologous recombination
PRK60_03100 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpor03032
]
PRK60_03100 (polA)
03400 DNA repair and recombination proteins [BR:
lpor03400
]
PRK60_03100 (polA)
Enzymes [BR:
lpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PRK60_03100 (polA)
DNA replication proteins [BR:
lpor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PRK60_03100 (polA)
DNA repair and recombination proteins [BR:
lpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PRK60_03100 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRK60_03100 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_polI_exo1
5_3_exonuc_N
5_3_exonuc
Myo5a
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WCT61362
LinkDB
All DBs
Position
617238..619898
Genome browser
AA seq
886 aa
AA seq
DB search
MAKQLLLIDGNSIVFRAFFAMHNQIDKFTNKDGLHTAAIYGFKLMLDHVLANFHPDAALV
AFDAGKVTFRTKMYGDYKGGRSKTPEELTEQLPYVRELVKDSGLHSYELKGYEADDIIGT
LAKEGDDAGYETLIVTGDRDLTQLASEHTTVAVTHKGVTDTEHYTPEHVQEKLGITPAQI
IDMKALMGDTSDNYPGVTKIGEKTAIKLVKQFGSVEGIYENIDKLKKSKMKEHLIEEEKI
ARQCKTLATILRDAPVEIKLADLEYKGPQTEKLIDFYQKMDFQSFLKKMAVSPDDQDIET
APIEYTELTADNLDLVAKLGDRGSFYLEMPDPNYHTSPFAGFALGNDKQWLVSRDPELLK
TPELKSWLTDSKIKKDVFNAKAQIVGLNRLGIALDGIDFDLLLASYLLNTNDNSNDLGKL
AHEHGYDDVQTDEEVYGKGAKRAIPDDDQLFFQHLANKARAIEQLRPQLFEQLKKNEQLP
LYTDIELPLTQVLAKMEITGVHVDAQTLKNMGSKLTERLTEIEEQIYQEAGEEFNINSTK
QLGKILFEKLKLPVIKKTKTGYSTAVDVLEKLAPQAPIVENILQYRQISKLQSTYIKGLL
KVIHSSDQKIHTRYLQTLTQTGRLSSVDPNLQNIPVRLPEGRLIRQAFVPSHEGWQIFSS
DYSQVELRVLAHITGDHNLQEDFKNGEDIHASTARRIFHLKPDQEIDRNMRRRAKAVNFG
IVYGISDYGLAQRIHVSRSQAHEFIQNYFKEFPKVKDYIHNTIEFARQNGYVETITHRRR
YLPDINAKSFSRRSFAERTAMNTPIQGSAADIIKIAMIKMQDELEKRQLKAKMLLQIHDE
LVFEAPKEEIPVLSKLVPDVMDSAVKLSVPLKVDSKYGDTWYDLKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaactattattaattgatggtaacagcattgtttttcgggcattttttgcg
atgcacaaccagattgataaatttactaacaaggacggtctgcacacggcagctatttat
ggcttcaaattaatgcttgatcatgttttagcaaattttcatccagatgcagcattagtc
gcttttgatgctggtaaggttacttttcgaaccaaaatgtatggcgactataagggtggc
cggagtaagactcccgaagaattaaccgagcaacttccgtatgtccgtgaactagtaaaa
gattctggattacatagttatgaattaaagggctatgaggctgatgatattatcggaacc
ctcgctaaggaaggcgatgatgctggttatgagacgttaatcgttacaggtgaccgtgac
ttaacccaactcgccagtgaacatactacggtagcagttacccataagggagttactgat
actgaacattatacgccagaacatgttcaagaaaaacttgggatcacaccagctcagatt
atcgatatgaaagctttaatgggtgatacttctgataattatcctggagttaccaaaatt
ggggaaaagaccgcaattaagcttgtaaaacagtttggttctgtcgaaggtatttatgaa
aatattgataaattgaaaaagagcaagatgaaagaacacctaattgaagaggaaaagatt
gctcgacagtgtaagacgttagccacaattttgcgtgacgcaccggttgaaattaagcta
gcagatcttgaatataagggcccgcaaacagaaaaactaattgatttctaccagaagatg
gattttcagtcattcttgaagaaaatggctgtttcaccagatgatcaggacattgaaact
gcaccgattgagtatacagaactaaccgctgataacctggatctagttgctaaattaggt
gatcggggaagcttttacttagagatgccggatccaaactatcatacttcaccatttgcc
ggctttgcgctgggcaacgataaacagtggttagtaagtcgtgatcctgaattgctgaag
actcctgaactcaaaagctggttaacagattctaagatcaagaaggacgtttttaatgca
aaagcacagattgttggcttgaaccgattaggaattgctcttgatggaattgattttgat
cttcttctggcatcctatcttttgaatactaatgacaatagcaatgatctgggaaaatta
gctcatgagcatggatatgatgatgtgcaaacggatgaagaggtttatggaaagggagct
aagagggcaatccctgatgatgatcagctgttctttcagcaccttgccaataaggcacgg
gcaattgaacaattgcgccctcaattatttgaacagttaaagaaaaacgaacagttacct
ctttatactgatattgaattgccactaacccaggtcttagccaaaatggaaattactggg
gttcatgttgacgcgcaaacgttaaagaatatggggagcaagttaactgaacggctcacg
gagattgaagaacagatttatcaagaagctggcgaagagtttaacattaactctactaaa
cagcttggtaaaattctctttgaaaagttaaagctacctgttattaagaaaactaagaca
gggtattcaacagctgttgacgttctcgaaaaattagctccccaggcaccaattgtggaa
aatattcttcaatatcgtcagatctcaaagcttcaatcaacgtatattaagggactgcta
aaagttattcattcgagcgatcaaaagatccatacccgttatttacaaacattaacccaa
actggacgcttatcgtcggttgatcctaatctacagaacatcccagtacgattaccagaa
gggcggcttattcgtcaagcgtttgtcccgagtcatgaagggtggcagatattctcttct
gattattcacaggttgaattacgagttctcgctcatattacaggtgatcataatcttcag
gaagactttaagaacggtgaggatatccatgccagtacagctcgccggatttttcattta
aagccggatcaagagattgaccgtaatatgcgtcggcgggcaaaggcagttaactttgga
attgtttatgggattagtgattatgggttagcccaacgaattcacgttagccgcagtcaa
gctcatgaattcattcaaaattactttaaagaattcccaaaggttaaggattatattcat
aacacgattgaatttgcacggcaaaatgggtatgttgaaacgattactcatcgtcgccgt
tacttaccagacattaatgccaagagcttcagtcggcgttcatttgctgaacgaaccgca
atgaatacgccaattcagggaagcgctgcggatatcattaaaattgcaatgattaagatg
caagatgaattagaaaagcgtcagttaaaggctaagatgcttctccaaatccatgacgaa
ttggtcttcgaagcgccaaaagaagagattccagtattgagtaaactggttcctgatgta
atggattcagcggttaaactttctgttccgttaaaggtcgatagtaaatatggtgacacg
tggtatgatctaaagaaataa
DBGET
integrated database retrieval system
