Limosilactobacillus portuensis: PRK60_04160
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Entry
PRK60_04160 CDS
T08838
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lpor
Limosilactobacillus portuensis
Brite
KEGG Orthology (KO) [BR:
lpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpor03032
]
PRK60_04160
03036 Chromosome and associated proteins [BR:
lpor03036
]
PRK60_04160
03400 DNA repair and recombination proteins [BR:
lpor03400
]
PRK60_04160
DNA replication proteins [BR:
lpor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PRK60_04160
Chromosome and associated proteins [BR:
lpor03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PRK60_04160
DNA repair and recombination proteins [BR:
lpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PRK60_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
Rpf1_C
HTH_78
Motif
Other DBs
NCBI-ProteinID:
WCT61554
LinkDB
All DBs
Position
825543..825818
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELVSNVATATGLTKKDATAAVDAVFSSIQASLAKGEKVQLIGFGNFEVRQRAARK
GRNPQTGQEIQIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaagcagaattagtaagtaatgttgcaactgcaactggtttaactaagaag
gatgctactgctgctgttgatgcagtatttagttcaatccaagcatcattagctaagggt
gaaaaggttcaattgatcggtttcggtaacttcgaagtacgtcaacgtgctgctcgtaag
ggtcgtaacccacaaactggtcaagaaatccaaatccctgcaagcaaggtaccagcattt
aagcctggtaaagctttgaaggatgctgttaagtaa
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