Limosilactobacillus portuensis: PRK60_05395
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Entry
PRK60_05395 CDS
T08838
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lpor
Limosilactobacillus portuensis
Brite
KEGG Orthology (KO) [BR:
lpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpor03016
]
PRK60_05395 (rnz)
Enzymes [BR:
lpor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PRK60_05395 (rnz)
Transfer RNA biogenesis [BR:
lpor03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PRK60_05395 (rnz)
Prokaryotic type
PRK60_05395 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
WCT60031
LinkDB
All DBs
Position
complement(1072799..1073728)
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AA seq
309 aa
AA seq
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MQLEFLGTGAGSPSKQRNVTSVALKLLEELNEIWLFDAGEATQHQILHTTIRPRKVTKIF
ITHLHGDHIFGLPGFLSSRSFQGGNEPLTIYGPVGIKKFVITALQVSESRLSYPLKFVEI
DHSQELFNDRGFKVTTMSLDHKIACYGYRIEEADHPGELQVDKLRQDNIPSGPIYGQLKA
GKTVKLDDGRVIDGRNYIGKPQPGRIIAILGDTRQTPNAVVLAHQADVLVHESTFAKNEA
KMAHNYYHSTSLQAAEVAKQAGAKKLLLTHISARYTGKAAYQLAYQVRDVVPDTRVVNDF
DVIDVPFKK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaatttttaggaactggagccggctcaccaagtaagcagcgaaacgttact
agtgttgccttgaaattattagaagagttaaatgaaatttggttatttgatgcgggagaa
gcaacccaacaccaaattcttcacacgacgattcgcccaagaaaggtaacaaagatcttt
attacccaccttcacggcgaccatatttttggcttaccaggattcttaagttcacggtca
tttcagggtggaaatgagccgttaacaatttatggaccggtgggaattaaaaagtttgtg
ataacggcccttcaggtgagtgaatcacgactaagttatcctctgaaattcgttgaaatt
gatcatagtcaagaattatttaacgatcgcggctttaaagtaacaacgatgtcacttgac
cataagattgcttgctacggctaccggattgaagaggctgatcatcctggtgagctgcaa
gtagataagttacgtcaagataatattccttctgggccaatctacggtcaattaaaagca
ggaaagacagttaagcttgacgatgggagagtaattgatgggagaaactatattggaaaa
ccgcaaccagggcgaattatcgcaattcttggcgacacacggcaaacgcctaacgcggta
gtccttgctcatcaagcggacgttctcgtgcatgaaagtacgtttgctaaaaatgaggcc
aaaatggcgcacaattactatcactcaacgagtctccaagcggcggaggttgccaagcag
gcaggcgcaaagaagttattgttgacccatatttcagcacggtatacagggaaagcggca
taccagttagcataccaggtccgtgatgttgtaccagacacgagggtagtaaatgacttt
gatgtgattgatgtcccatttaaaaaataa
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