Legionella pneumophila Paris (serogroup 1): lpp0004
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Entry
lpp0004 CDS
T00209
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B (type II topoisomerase)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lpp
Legionella pneumophila Paris (serogroup 1)
Brite
KEGG Orthology (KO) [BR:
lpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpp03032
]
lpp0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
lpp03400
]
lpp0004 (gyrB)
Enzymes [BR:
lpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
lpp0004 (gyrB)
DNA replication proteins [BR:
lpp03032
]
Prokaryotic type
DNA Topoisomerases
lpp0004 (gyrB)
DNA repair and recombination proteins [BR:
lpp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lpp0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
CAH11152
Pasteur:
lpp0004
LinkDB
All DBs
Position
4034..6451
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AA seq
805 aa
AA seq
DB search
MSVDASYDSNNIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDESLAGYCKE
IFVTIHSDESITVKDDGRGIPVDIHKEEGKSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELHLLVRRHGKVYEQHYRHGVPESPIAETGEANSTGTQIWFKPSAETFSN
IEFHYDILAKRLRELSYLNSGVCIHLFDERTQKKDTFHYEGGIKAFVEHLNKNKTPVHPV
VFSMTSEKDGIVIELAMQWNDGYQETIFCFTNNIPQRDGGTHMAGFRAALTRTLNNYIEN
EGYAKKAKVSPTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPAVESCVAEKFND
FLLENPTASKSIVAKIIDAARAREAARRAREMTRRKGALDIAGLPGKLADCQEKDPSLSE
LYLVEGDSAGGSAKQARDRKFQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
PEEYDPDKVRYHRIIIMTDADVDGSHIRTLLLTFFYRQTRELLERGYIYIAQPPLYKVKR
GKQEQYVKDDEALFDYLTQCALDGATFYPAKEAPPISAKSLEELVQHFRRVEKIIKRYKR
RYPSDILKRVAYMPMLHQEDFNNLPKIENWCRQLHLSLQQVDSKTEQYKVDIQKLTEGNQ
YTPKITVYQHGLENDIPMQVEFFLSKDYKEMVDLGHKLSNLIEEGAYIQRGDKSLPVENF
EQVLNWLMDEAKKGQTIQRYKGLGEMNPEQLWETTMDPEVRRMLQVSIEDAVAADEIFTT
LMGDNVEPRRDFIETNALDAENIDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagacgccagttatgattcaaataatattaaagtcctaaaaggtttagacgca
gtaagaaaaagaccgggcatgtacattggggatacagatgatggaaccggtttgcatcat
atggtttttgaggttgtagataattcaatagatgaatccctggcaggttattgcaaggaa
attttcgttaccattcatagcgatgaatcaattaccgttaaggatgatggtcgtggtatt
cctgtcgatattcataaggaagaaggaaaatcagctgctgaagtcattatgacagtcctg
catgccggaggtaaatttgatgataactcttacaaggtatcaggcggtctacatggagta
ggggtatctgtggtgaatgccctttctgaagagttgcatttgctagtacgtagacatgga
aaagtgtatgagcaacattacaggcatggtgttcctgaatctcctattgctgaaactgga
gaagccaactctactggcacacaaatatggtttaaaccaagcgctgaaaccttttctaat
attgagttccattacgacattctagctaaaagattacgtgaattgtcatacctgaactca
ggtgtttgtattcacttatttgatgaaagaacacagaaaaaagacacgtttcactacgaa
ggcggtatcaaagcctttgttgagcacttaaataaaaataaaacaccagtccaccccgtt
gttttctcaatgacatcggaaaaagacggtatcgtcattgaactggcaatgcaatggaat
gatggctatcaagaaactatattttgctttactaacaacatcccacaaagggatggtgga
acacatatggctggctttagagcagcattaactcgcactttaaataattacatagaaaac
gaagggtatgctaaaaaggcaaaagtatctccaacaggtgatgatgctcgcgaaggatta
acagctgttctttcagtaaaagtccctgatcccaagttttcatcgcaaacgaaagataaa
ctggtttcatctgaagtaaaaccagcagtagaatcctgcgttgctgaaaaatttaacgat
tttcttttagaaaatcccactgcatcaaaatccatcgtagcaaaaattattgatgcagca
agagctagagaggcagcgcggcgtgctcgtgaaatgactcgacgtaaaggggctttggat
attgctggtttaccaggtaaattagctgattgccaagaaaaagacccatcgctttctgag
ttgtatttagttgagggtgactctgcaggaggctcagcaaaacaagcgcgagacagaaaa
ttccaggctattttacctcttaaaggcaagattcttaatgttgaaaaagcccggtttgac
aagatgctttcttctcaagaagtagccactttgattactgcattaggctgtggaattggt
cccgaggaatatgatccagataaagtacgttatcatagaatcatcattatgacagatgct
gatgtggatgggtctcacataagaactttacttcttacctttttctatagacaaaccaga
gagctattggaacgaggatatatttatattgcacaaccacctttgtataaagtaaagcgt
ggaaaacaggagcaatatgttaaagatgatgaagcgttatttgattatctaacgcagtgc
gcgttggatggggcgacattttatcccgccaaagaggctccgcccatatctgccaaatcg
ctggaagaattggttcaacatttcagacgagttgagaagattataaagcggtacaagaga
agataccccagcgatatactaaaaagagtagcttatatgccaatgctgcaccaagaggat
tttaacaatctgccaaaaattgaaaactggtgcagacaattacatctaagcttacaacaa
gtagacagtaaaacagaacaatacaaagtagatatccaaaaacttacagaaggtaatcaa
tacaccccaaaaattactgtgtaccagcatggcttggaaaatgatattccaatgcaagtt
gaatttttcttgtctaaagattacaaagaaatggttgatttaggacacaaattatcgaat
ttgatagaggaaggcgcctatattcaacgtggagataaatccttgcctgtggaaaacttt
gagcaagtacttaattggctaatggatgaagcaaaaaaaggacaaacaattcagcgctat
aaaggtcttggggaaatgaatcccgagcagttatgggaaacgaccatggatcctgaggtt
agacgaatgttgcaagtgagtatcgaagatgctgtagctgcagatgaaatctttaccacc
ttaatgggcgacaatgtagaaccaagaagagatttcattgaaacgaatgccttagatgct
gaaaacattgatatataa
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