Legionella pneumophila Paris (serogroup 1): lpp0320
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Entry
lpp0320 CDS
T00209
Symbol
rhlE
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lpp
Legionella pneumophila Paris (serogroup 1)
Pathway
lpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lpp0320 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpp03019
]
lpp0320 (rhlE)
Enzymes [BR:
lpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lpp0320 (rhlE)
Messenger RNA biogenesis [BR:
lpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lpp0320 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
UTP25_NTPase-like
Exotox-A_bind
Motif
Other DBs
NCBI-ProteinID:
CAH11468
Pasteur:
lpp0320
LinkDB
All DBs
Position
complement(364810..366054)
Genome browser
AA seq
414 aa
AA seq
DB search
MSFKQLALIEPLNRAVSELGYTNPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPIL
QKASQQTQTSRNRAKVLILTPTRELAIQAHESIIQYGKYLTLRSAVIYGGVKSHNQIKQL
DSGLEILVATPGRLLDLYQQGAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQ
NLLFSATFTPEVRTLARNILNKAVEIDIAPRNTAVKTIKQTVYSVDGNHKLALLSHLLHK
NNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRTKALADFKSGKVQTLIAT
DIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRAGASGLAVSLVSTEEIKLLLSIEK
LINQKLERIKIKDFEFLHNFSDLVSAKIQKFAPPKAGYKGNISRKSRTAFNKSA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaacaattagcgctgattgagccgctaaacagggcggttagtgagttaggc
tatactaaccctaccagtattcaattaaaagccatcccgctcattttaaatgggcatgat
ttacttggttccgctcaaacaggaacaggaaaaacagcaagctttgtattgcctatcttg
caaaaagccagtcagcaaactcaaaccagccgtaatcgagctaaagtactgattttaacg
cccacacgagaattagccatccaggcccacgagagcataatccaatatggcaaataccta
acactgcgctcggctgtgatttacggaggagtaaaaagccacaaccaaattaaacaatta
gactcaggccttgagatacttgttgcaaccccgggaagattattggatttatatcagcaa
ggtgctgttaaatttgatgagattgacaccctggtactcgatgaggcggatagaatgctg
gatatggggtttattcatgatataaaaaaaattatcaaattattacctttaaaaaggcag
aacctgcttttttcagcaacctttactcctgaggtacgtactttagccagaaatatactg
aataaagcggttgaaattgatatcgcaccgagaaataccgcggtaaaaaccataaaacaa
actgtttattcagtagatggaaaccataagttagcccttctgagtcatttacttcataag
aataactggggacaaactttggttttttctcgaaccaaacatggagccaataaactggtt
aagcaactggccgaatcccaaatatattcagttgctattcatggcaacaaatcgcaggct
caacgaacaaaagccctggctgatttcaagtcaggcaaagtacaaacattaattgcaaca
gacattgcagcacgtggcatagacatcgagaaacttgcctgtgtagtgaattttgacctg
cctcatgtgcctgaggactacgttcatcggattggacgaacaggacgggcaggcgcctct
ggattggctgtatccttggtcagcacagaagaaatcaagctgctgctgtctatagaaaaa
ttaatcaatcaaaaattggagcgcattaaaattaaggattttgagtttttgcataacttt
tcagatttagtctcagccaaaattcaaaaatttgcgccgccaaaagcgggatataagggc
aatatcagcagaaaatccaggacggcttttaataaaagcgcgtaa
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