Legionella pneumophila Paris (serogroup 1): lpp1024
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Entry
lpp1024 CDS
T00209
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lpp
Legionella pneumophila Paris (serogroup 1)
Pathway
lpp03030
DNA replication
lpp03430
Mismatch repair
lpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lpp1024 (dnaE)
03430 Mismatch repair
lpp1024 (dnaE)
03440 Homologous recombination
lpp1024 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpp03032
]
lpp1024 (dnaE)
03400 DNA repair and recombination proteins [BR:
lpp03400
]
lpp1024 (dnaE)
Enzymes [BR:
lpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lpp1024 (dnaE)
DNA replication proteins [BR:
lpp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lpp1024 (dnaE)
DNA repair and recombination proteins [BR:
lpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lpp1024 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
DUF223
Motif
Other DBs
NCBI-ProteinID:
CAH12175
Pasteur:
lpp1024
LinkDB
All DBs
Position
1143240..1146686
Genome browser
AA seq
1148 aa
AA seq
DB search
MRQRFVHLRVHTEFSLVDGLVQIKPLMKALPARGMSTVAVTDFCNLFAAVKVFKSATEAG
IKPIIGSDLPCHDLETPDNIFSLVLLCQDTAGYKNLTCLVSKAYQEGQYHGQPRVQLQWI
PEFSQGLIALSGGKFGDIGQALLANDDTLARKRALHWMNLFPNRFYLEIQRTGRADELHY
NEKLVALADELQLPLVATNDVRFINEDDFDAHEARVCIHEGYTLADPRRVQQYSSQQYLR
SADEMELLFSDLPSALQNTVEISKRCNVKLELGHNYLPNFPIPDGTTVEAYLSHLSEIGL
EERLKQLFRDKSEGELLVARGEYDKRLKIELDVINNMGFAGYFLIVADFIQWAKQNGVPV
GPGRGSGAGSLVAYALKITDLDPLEYELLFERFLNPERVSMPDFDIDFCMEGRDRVIEYV
AEKYGRQSVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDKLAKLIPFELGITLSKAMEQE
EELRRRYEEEEEVKELFDLALKLEGVTRNAGKHAGGVVIAPSQLTDFTAIYCEEGSTQIV
SQFDKDDVEAVGLVKFDFLGLRTLTIIDWALATVNKQCENAGLSPIDISQIPTSDDSTFE
LLKACKTTAVFQLESRGMKELISRLQPDCFEDIIALVALFRPGPLQSGMVDDFIDRKHGR
ARVDYPHPDLEPILKPTYGVILYQEQVMQIAQVLANYTLGAADLLRRAMGKKKPEEMAKQ
REIFTQGAVARGVDEQVATHIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAAFM
AAVMSSDMDNTDKVVTFIDECAHMKLQVLPPSINNSMYHFTVSDEKTIIYGLGAIKGVGE
SAIECIIQERNQNGPFLDLFGFCQRLDLRKVNRRVIEALIKSGAFDIWKVERAVLTASLE
KALKVAEKEHQNQSSGQFDLFSLLEDKADEQNYVESKSWSEAQRLEGEREVLGFYLTGHP
ADRYRRELGDFIVPVGQLNPSLHKKAIICAQVVAIRKIITKRGKKLVIIGMDDATARIDA
VVFGEIFDQYSDPLATGNMLVIEGEVAIDDYNGGIKVTANQLLSIASARTKFARCLELRL
NQNNAAVLPSIQSLLKTYSGRCAVQLAYANGVAKANLNLGQQWCVTPSDELIGLLSNLLG
EEQVIMRY
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaacgatttgttcatttaagagtacatacggaattttcattagttgatggtttg
gtacagattaagccattgatgaaagctttgccagccagaggtatgagcacagttgctgta
acggatttttgtaatttattcgctgctgtcaaagtatttaaaagtgcgacagaggcggga
atcaaacccattattggtagtgatttgccatgccatgatttggaaaccccggataacatt
ttttctttggttttattatgtcaagacacagcaggttataaaaatttaacctgtctggta
tccaaagcatatcaagaagggcaatatcatggccaacccagggtgcaattacaatggatt
ccagaattttcacagggattaatcgcattatctggaggaaagttcggtgacattgggcaa
gcattgctggcaaatgatgacaccttggcaagaaaacgtgctttgcattggatgaattta
tttccgaatcggttttatctggaaattcagcgaaccggaagagctgatgagctgcattat
aatgagaagctggtcgcgttagcagatgagttgcaattacccctagttgcaaccaacgat
gtaaggttcatcaatgaggatgattttgacgctcatgaagctcgtgtatgcattcacgaa
gggtacactttggctgatcccaggagagttcaacaatacagctcccaacagtatctgcgc
tcagcagatgaaatggagctcttattttcggatcttcccagtgcattacaaaacacagtc
gaaattagtaaacgctgtaatgtaaaactcgagctgggccataactatctacctaatttc
cctataccggatggaacaacagtagaggcgtatttatcacatctttctgaaattggcttg
gaggaacgtttaaagcaattattcagagataagtctgagggggaactgcttgttgccaga
ggagagtacgacaaacgccttaaaattgaactggatgttattaataacatgggctttgct
ggctatttcctgattgttgctgattttattcaatgggctaaacaaaatggggttccagta
ggaccaggtcgtggttctggtgctggttctctggttgcttatgccctaaaaataacagat
ctggatcctttagagtatgagctgctttttgaacgattcttaaaccccgaacgtgtttct
atgcctgactttgatattgatttttgcatggaaggccgtgatcgggtcattgaatatgta
gcagagaaatatggccggcagagcgtttcccaaattattacttttggcactatggccgca
aaggctgtggtgagagatgttgggcgtgttttaggtcatccttatggctttgtggataag
cttgcgaaattaattccctttgagttaggcataactttaagtaaagcgatggagcaggaa
gaagagcttcgccgacgatatgaagaagaggaggaagtaaaagagctatttgatcttgcc
ctgaaattggagggagttactcgtaatgcaggcaagcatgctgggggagtggttattgca
ccttctcagctgactgatttcacggcaatatattgtgaagaaggatcaacacaaatagtt
agccaatttgataaagacgatgttgaggcggttgggttagtcaagtttgattttttagga
ttaagaacactaaccataatcgattgggccctggccacagtgaataagcaatgcgaaaat
gccgggttgtcaccaattgatattagccaaattccaacgagtgatgactctacttttgag
ttattaaaagcatgtaaaactactgctgtatttcagctggaatctcgaggcatgaaggag
ctgattagccggcttcaacccgattgttttgaagacatcattgctttggttgctttattc
agaccaggtcctctacagtcagggatggtggatgactttatcgacaggaagcatggcagg
gctcgagttgattacccccatccagacttggaaccaattcttaaacccacttatggggtt
atcctctatcaagaacaagtaatgcaaatcgctcaggttcttgccaattacacgcttggc
gctgctgacttgttaagacgagccatggggaagaaaaaaccggaagaaatggcaaagcaa
agggaaatttttacccagggagctgttgcgagaggagtagacgaacaggtagcaacccat
atttttgatttaatggagaagttcgccggatatggattcaataaatcacattctgccgcg
tacgctttagtcgcttatcaaaccgcctggctaaaagcacattatcctgcagcttttatg
gctgcggtgatgtcctctgatatggataacacggataaggttgtaacttttattgatgaa
tgcgcgcacatgaaattacaagtgttgcctccttctatcaataactccatgtatcatttt
accgtatccgatgaaaagacgattatttatggccttggggcaataaagggggttggcgaa
tctgcgattgagtgtattattcaggagagaaaccagaatggaccttttttggatttgttt
ggtttttgtcaaagattggatttacgcaaagtcaacagaagagtgattgaagctttaatc
aagagtggtgcttttgatatttggaaagtggaaagggctgtattaacagcgtccttggaa
aaagcactgaaagttgccgaaaaggaacatcaaaatcaatcaagtggacaatttgatcta
ttctcccttttagaggacaaagcggatgaacaaaattatgtggaaagtaaatcctggtct
gaagcccaaagattagaaggcgaaagagaggtattaggtttttaccttactggccatcct
gctgaccgatacagacgtgaattgggagattttattgttcctgtcggccaattaaatccg
tctttacataaaaaagcgattatttgcgctcaggttgtagcaattagaaaaattatcacc
aaacgtggcaagaaattggtgattattggaatggatgatgcgactgccaggattgatgcc
gtagtttttggtgagatttttgatcaatattctgatccgttggcgacgggtaacatgctt
gtaattgagggtgaggttgcaattgatgattacaacggtggtattaaagtgaccgccaat
cagcttttaagtatcgcttcagctcgaacaaaattcgctcgttgtctggagttgcgttta
aatcaaaacaatgctgctgtattgccttctatccaatccttactgaagacttattcagga
cggtgtgctgttcaattggcttatgctaatggtgttgctaaagctaatttaaatcttggc
caacaatggtgtgtgacccctagcgatgagttaattggactattgagcaatcttttaggg
gaagaacaagtaataatgcgttattag
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